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Items tagged with "substructure querying" (2)

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Workflows (2)

Workflow Scaffold Analysis | Statistical analysis o... (1)

This workflow performs an extraction and statistical analysis of Murcko scaffolds for compounds being active against (a) different target(s). Specifically, target-wise detection of Murcko Scaffolds in active versus inactive compounds, filtering steps by removing too generic scaffold (i.e., number of rings equals to one OR number of heteroatoms in a ring is zero or one), calculating the frequency of a particular scaffold which appears frequently in the active over inactive class, applying Fish...

Created: 2018-10-25

Credits: User Alzbeta Tuerkova User Barbara Zdrazil

Workflow Substructure querying | R-group decomposit... (1)

This workflow creates maximum common substructure (MCS) out of the provided structures and then substructure mining using MCS as a structural query is performed. Obtained hits are then subjected to R-group decomposition to explore their functional groups. Optionally, physicochemical descriptors for individual functional groups can be calculated.

Created: 2018-10-25

Credits: User Alzbeta Tuerkova User Barbara Zdrazil

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Non-Information Resource URI: https://www.myexperiment.org/tags/5999

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