This workflow uses one or more services that are deprecated as of 31st December 2012 (almost 7 years ago), and may no longer function. Show details...

KEGG Pathways and Additional Information from BLAST

Created: 2011-03-29 11:16:17      Last updated: 2011-03-30 16:09:01

Takes in a tab-delimited BLAST file and finds additional information about the target proteins from KEGG, Gene Ontology, Interpro and PubMed.


Information Preview

Information Run

Run this Workflow in the Taverna Workbench...

Option 1:

Copy and paste this link into File > 'Open workflow location...'
https://www.myexperiment.org/workflows/1992/download?version=2
[ More InfoExpand ]


Information Workflow Components

Information Authors (2)
Information Titles (2)
Information Descriptions (3)
Information Dependencies (0)
Inputs (1)
Processors (10)
Beanshells (14)
Outputs (9)
Datalinks (19)
Coordinations (1)

Information Workflow Type

Taverna 2

Information Uploader

Information License

All versions of this Workflow are licensed under:

Information Version 2 (latest) (of 2)

View version:

Information Credits (1)

(People/Groups)

Information Attributions (1)

(Workflows/Files)

Information Tags (6)

Log in to add Tags

Information Shared with Groups (1)

Information Featured In Packs (0)

None

Log in to add to one of your Packs

Information Attributed By (0)

(Workflows/Files)

None

Information Favourited By (0)

No one

Information Statistics

 

Citations (0)

None


Version History

In chronological order:



Reviews Reviews (0)

No reviews yet

Be the first to review!



Comments Comments (0)

No comments yet

Log in to make a comment




Workflow Other workflows that use similar services (101)

Only the first 2 workflows that use similar services are shown. View all workflows that use these services.


Workflow Drug Re-Purposing Workflow (6)

Thumb
The drug repurposing workflow system screens at least 20 bacterial proteomes against this set of proteins that are already being treated against using established drugs. By screening the bacterial proteomes it will be possible to find proteins of highly similar structure to those that are existing drug protein targets and so this will infer that it is highly likely that the drugs can be used as antimicrobials against these proteins of highly similar structure. Proteomes that will be screene...

Created: 2011-03-25 | Last updated: 2011-04-01

Credits: User Morgan Taschuk Network-member A Team

Workflow Vaccine Targets Workflow (3)

Thumb
Comparison of the genome of Bacillus anthracis to closely related strains will allow the discovery of proteins which may be involved in pathogenicity. Based on the biochemical pathways where the protein interacts, vaccines can be designed for these unique proteins. By gaining insight into the biochemical pathways that the unique proteins are involved in, the proteins can also be assessed for potential quality as vaccines. The key components of the vaccine finding system are the following: T...

Created: 2011-03-30 | Last updated: 2011-04-01

Credits: User Morgan Taschuk Network-member A Team