Age specific analysis

Created: 2012-11-02 14:28:56      Last updated: 2014-07-24 12:24:05

The age specific analysis workflow gives the basic information on age-specific survival, this includes the mean, variance and coefficient of variation (cv) of the time spent in each stage class and the mean and variance of the time to death.

Fundamental matrix (N): is the mean of the time spent in each stage class.

Variance (var): is the variance in the amount of time spent in each stage class.

Coefficient of variation (cv): is the coefficient of variation of the time spent in each class (sd/mean- the ratio of the standard deviation to the mean).

Meaneta: is the mean of time to death, of life expectancy of each stage.

Vareta: is the variance of time to death.

============================================================

This workflow has been created by the Biodiversity Virtual e-Laboratory (BioVeL http://www.biovel.eu/) project. BioVeL is funded by the EU’s Seventh Framework Program, grant no. 283359.

This workflow was created using and based on Package ‘popbio’ in R.

Stubben, C & B. Milligan. 2007. Estimating and Analysing Demographic Models Using the popbio Package in R. Journal of Statistical Software 22 (11): 1-23

Stubben, C., B. Milligan, P. Nantel. 2011. Package ‘popbio’. Construction and analysis of matrix population models. Version 2.3.1

============================================================ For further details see:

Caswell, H. 2001. Matrix population models: Construction, analysis and interpretation, 2nd Edition. Sinauer Associates, Sunderland, Massachusetts.

Information Preview

Information Run

Run this Workflow in the Taverna Workbench...

Option 1:

Copy and paste this link into File > 'Open workflow location...'
https://www.myexperiment.org/workflows/3286/download?version=3
[ More InfoExpand ]


Information Workflow Components

Information Authors (1)
Information Titles (1)
Information Descriptions (1)
Information Dependencies (0)
Inputs (4)
Processors (2)
Beanshells (0)
Outputs (1)
Datalinks (6)
Coordinations (0)

Information Workflow Type

Taverna 2

Information License

All versions of this Workflow are licensed under:

Information Version 3 (latest) (of 3)

View version:

Information Tags (8)

Log in to add Tags

Information Shared with Groups (3)

Information Featured In Packs (1)

Log in to add to one of your Packs

Information Attributed By (5)

(Workflows/Files)

Information Favourited By (0)

No one

Information Statistics

 

Citations (0)

None


Version History

In chronological order:



Reviews Reviews (0)

No reviews yet

Be the first to review!



Comments Comments (0)

No comments yet

Log in to make a comment




Workflow Other workflows that use similar services (0)

There are no workflows in myExperiment that use similar services to this Workflow.