EBI_InterproScan_NewServices

Created: 2014-04-03 09:48:29      Last updated: 2014-04-09 13:27:22

This workflow performs an interproscan at the EBI on sequences provided as input. The output is provided as text and xml. This workflow uses the new EBI services, which are asynchronous and require looping over the nested workflow (Status) until the workflow has finished. Many of the EBI services now work in this way, so you can use this workflow as an example of the invocation pattern and looping configuration.

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  • Thursday 10 April 2014 10:22:48 (UTC)

    I added the example value sequence as a file for testing with Taverna CommandLine.

    It can be found at: http://www.myexperiment.org/files/1146.html




Workflow Other workflows that use similar services (3)

Only the first 2 workflows that use similar services are shown. View all workflows that use these services.


Workflow EBI_InterproScan_NewServices (2)

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This workflow performs an interproscan at the EBI on sequences provided as input. The output is provided as text and xml. This workflow uses the new EBI services, which are asynchronous and require looping over the nested workflow (Status) until the workflow has finished. Many of the EBI services now work in this way, so you can use this workflow as an example of the invocation pattern and looping configuration.

Created: 2012-04-05 | Last updated: 2014-04-09

Credits: User Alan Williams

Workflow EBI_InterproScan_broken (1)

Thumb
This workflow performs an interproscan at the EBI on sequences provided as input. The output is provided as text and xml. This workflow uses the new EBI services, which are asynchronous and require looping over the nested workflow (Status) until the workflow has finished. Many of the EBI services now work in this way, so you can use this workflow as an example of the invocation pattern and looping configuration. Note that this workflow is deliberately broken

Created: 2014-07-09

Credits: User Alan Williams User Katy Wolstencroft User Hamish McWilliam

Attributions: Workflow EBI_InterproScan_NewServices