Blat against ENSEMBLE Danio_rerio_Genome

Created: 2008-10-15 09:25:43      Last updated: 2008-10-15 09:27:23

The blat workflow invokes the blat services provided at (author Pieter Neerincx). As input, it takes a database name (for example, Danio_rerio_Genome for Zebra Fish) and one or more sequences in Fasta format. The output will be a tab separated output of the blat. An eValue string constant is added to filter on the e-Value. Note, the e-Value is not exactly the same as the blast e-Value.

To run this workflow, a certificate to access needs to installed (Some services use an SSL connection). Look at the link below how to install this certificate.


Information Preview

Information Run

Run this Workflow in the Taverna Workbench...

Option 1:

Copy and paste this link into File > 'Open workflow location...'
[ More InfoExpand ]

Information Workflow Components

Inputs (2)
Processors (12)
Beanshells (1)
Outputs (1)
Links (14)
Coordinations (0)

Information Workflow Type

Taverna 1

Information Uploader

Information License

All versions of this Workflow are licensed under:

Information Version 1 (of 1)

Information Credits (1)


Information Attributions (0)



Information Tags (1)

Log in to add Tags

Information Shared with Groups (0)


Information Featured In Packs (0)


Log in to add to one of your Packs

Information Attributed By (1)


Information Favourited By (1)

Information Statistics


Citations (0)


Version History

In chronological order:

Reviews Reviews (0)

No reviews yet

Be the first to review!

Comments Comments (0)

No comments yet

Log in to make a comment

Workflow Other workflows that use similar services (0)

There are no workflows in myExperiment that use similar services to this Workflow.