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Tag: pubchem User: Michael Gerlich Wsdl: http://eutils.ncbi.nlm.nih.gov/entrez/eutils/soap/eutils.wsdl or http://pubchem.ncbi.nlm.nih.gov/pug_soap/pug_soap.cgi?wsdl or http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/eutils.wsdl or http://www.chemspider.com/MassSpecAPI.asmx?WSDL or http://www.chemspider.com/Search.asmx?WSDL

Workflow Search InChI in NCBI eSearch (pccompound) (1)

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This workflow takes in a search term (e.g. InChI) for search in PubChem pccompound database. The result is an xml file containing summary information about the search term and also a compound image and the compound webpage fetched from Pubchem.

Created: 2009-03-30 | Last updated: 2009-03-30

Credits: User Michael Gerlich

Workflow Download Entries from PubChem (1)

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Given a list of identifiers (e.g. CID) and their appropriate type (eID_CID - note that these differ slightly from the original identifier name -> CID <-> eID_CID), this workflow queries PubChem via PUG to retrieve a download URL for the resulting XML file containing the results. Adding support for downloading this XML file and writing it to filesystem is planned.

Created: 2009-03-30 | Last updated: 2009-03-30

Credits: User Michael Gerlich

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