Workflows

Search filter terms
Filter by type
Filter by tag
Filter by user
Filter by licence
Filter by group
Filter by wsdl
Filter by curation
Results per page:
Sort by:
Showing 103 results. Use the filters on the left and the search box below to refine the results.
Tag: workflow Licence: by-sa
Uploader

Workflow Antiviral activity multiclass Predictor (1)

Thumb
A simple multi-class antiviral activity predictor based on expanded Pubchem fingerprints and random forest algorithm. Seems to work well to perform quick screens for antiviral molecules.Download training data from CTD (http://ctdbase.org/downloads/) or  use this preprocessed version https://www.myexperiment.org/files/2285.html. Write to me at rajeev.gangal@gmail.com regarding any queries.I make no claim that the predictive model is accurate for clinical hypotheses or that it will find mo...

Created: 2020-03-23 | Last updated: 2020-03-25

Credits: User Insilicoconsulting

Uploader

Workflow Untargeted metabolomics reveals molecular ... (1)

Thumb
Normal 0 false false false EN-US X-NONE AR-SA ...

Created: 2019-06-21

Credits: User David_MTX

Workflow MSA Gaps Trimming Workflow (1)

Thumb
The workflow for prefix and suffix gaps trimming of MSA result in the Phylip format.Input: MSA result in the Phylip format.Output: Trimmed prefix and suffix of the MSA result.

Created: 2016-02-28

Credits: User Kasikrit Damkliang

Workflow MSA Similarity Score Estimation (1)

Thumb
The workflow for MSA Similarity Score Estimation 

Created: 2016-02-28

Credits: User Kasikrit Damkliang

Uploader

Workflow Texture classification: Knime Image Analytics (1)

Thumb
A workflow including image pre-processing and descriptor calculation for building a texture classification model. The workflow can really be used for any kind of image classification task for which has labelled training data.There is significant scope of improvement, both on the image processing , descriptor selection and model building phases..Happy image analytics !

Created: 2015-11-10

Credits: User Insilicoconsulting

Uploader

Workflow Pubmed -Google Tag Cloud (1)

Thumb
A simple workflow to query PubMed, Google and build a Tag Cloud after some preprocessing.

Created: 2015-11-01

Credits: User Insilicoconsulting

Uploader

Workflow Drug-Drug Networks using Matador-DrugBank ... (1)

Thumb
These days, Networks of all kinds are all the rage! So here's a trickle contributing to the flood.The workflow generates a network based on Similarity between known drugs based on commonality of their "direct" drug target interactions.The workflow does not provide a comparison between Chemical similarity based network and one based on shared drug targets. It only provides the latter.Other nodes and interfaces to Cytoscape and exported csv can be used to further the network analy...

Created: 2015-09-17 | Last updated: 2015-09-17

Credits: User Insilicoconsulting

Uploader

Workflow SAR by Rgroup decomposition (1)

Thumb
This workflow showcases a simple way to use Rgroup decomposition for SAR analysis.Once R-groups are obtained for several sites on the Scaffold, molecular properties like logP, TPSA, number of heavy/hetero-atoms, various kinds of ring counts are calculated.While medicinal chemistry purists may decry calculating properties for fragments/R-groups, correlating these at each site with Ki (or activity) shows up interesting trends.It's immediately apparent if increasing logP at a given site incr...

Created: 2015-09-15

Credits: User Insilicoconsulting

Workflow Chemical2URIs (1)

Thumb
This workflow will map a chemical name or identifier to uniform resource identifiers (URIs). First the ChemSpider web service is used to map the chemical name to a ChemSpider identifier, then the ChemSpider identifier is mapped to URIs via the Open PHACTS platform.

Created: 2015-08-18

Credits: User Kristina Hettne User Eelke van der Horst Network-member BioSemantics

Workflow Access OpenDAP (1)

test workflow to test OpenDAP

Created: 2015-06-09

Credits: User Siddeswara Guru

Results per page:
Sort by: