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Taverna 2
Uploader
Avatar Sixuan Wang

Workflow Workflow of IFC data collection, crowd mod... (3)

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Simulation workflow for crowd modeling in building. It combines all the components needed for crowd simulation (CAD/BIM data collection, crowd modeling, crowd simulation and 3D visualization). This version cannot be executed as is due to local tools dependancies (the components in yellow). The lattest version is available in http://www.myexperiment.org/workflows/4247.html.

Created: 2013-12-18 | Last updated: 2014-06-24

Taverna 2
Uploader
4080?size=60x60 Renato De Giovanni
Project Biovel

Workflow project_model (9)

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Projects a model based on the specified parameters.

Created: 2013-12-24 | Last updated: 2014-12-04

Taverna 2
Uploader
4080?size=60x60 Renato De Giovanni
Project Biovel

Workflow biostif_upload_raster (4)

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Uploads a raster from a given URL to a BioSTIF server, from where it can be displayed through the BioSTIF web interface.

Created: 2013-12-24 | Last updated: 2015-05-11

Taverna 2
Uploader
4080?size=60x60 Renato De Giovanni
Project Biovel

Workflow select_matching_layers (5)

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Displays an interface where users can select matching layers (same variables) based on the labels of previously selected layers. This is typically needed when projecting a model into a different scenario, where the same variables selected for model creation need to be used on a different chronologic or geographic context. The interaction page may optionally include a label field.

Created: 2013-12-24 | Last updated: 2015-05-11

Taverna 2
Uploader
1217?size=60x60 Gb Alan Williams

Workflow Download images for gene (3)

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This workflow downloads the first few images corresponding to experiments for the specified gene

Created: 2014-07-13 | Last updated: 2014-07-15

Credits: User Alan Williams

Taverna 2
Uploader
1217?size=60x60 Gb Alan Williams

Workflow Experiments for gene (2)

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This workflow uses the Allen Brain REST API to fetch the experiements corresponding to a named gene

Created: 2014-07-15 | Last updated: 2014-07-15

Credits: User Alan Williams

Taverna 2
Uploader
1217?size=60x60 Gb Alan Williams

Workflow EBI_InterproScan (1)

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Perform EBI Interproscan

Created: 2014-07-16 | Last updated: 2014-07-16

Taverna 2
Uploader
4562?size=60x60 Nl Maria Paula Balcazar-Vargas
Project Biovel

Workflow Keyfitz delta (1)

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The Keyfit delta Workflow provides an environment to calculate the Keyfit delta value. Keyfitz’s delta is a measure of the distance between any two probability vectors (Keyfitz 1968). In this case is a measure of the distance between n (Observed Stage Distribution) and w (Stable Stage Distribution). The maximum value is 1 and the minimum value is 0 (when the vectors are identical). ============================================================ This workflow has been created by the Biodiversit...

Created: 2014-07-23

Credits: User Maria Paula Balcazar-Vargas User Jon Giddy User Gerard Oostermeijer

Attributions: Workflow Matrix Population Model analysis v12 Workflow Matrix Population Model construction and analysis v20

Taverna 2
Uploader
4562?size=60x60 Nl Maria Paula Balcazar-Vargas
Project Biovel

Workflow Cohen’s cumulative distance (1)

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The Cohen’s cumulative distance Workflow provides an environment to calculate the Cohen’s cumulative distance. The Cohen’s cumulative distance measures the difference between observed and expected vectors along the matrix path that the population would take to reach the expected population vector. It is a function of both the observed stage distribution (n0) and the structure of the matrix (A) (Williams et al 2011). Cohen’s cumulative distance will not work for reducible matrices or imprimiti...

Created: 2014-07-23

Credits: User Maria Paula Balcazar-Vargas User Jon Giddy User Gerard Oostermeijer

Attributions: Workflow Matrix Population Model analysis v12 Workflow Matrix Population Model construction and analysis v20

Taverna 2
Uploader
4562?size=60x60 Nl Maria Paula Balcazar-Vargas
Project Biovel

Workflow Simulate stochastic growth from a sequence... (1)

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The Simulate stochastic growth from a sequence of matrices Workflow provides an environment to simulate stochastic growth by projection using whole matrix selection techniques in an independently and identically distributed (iid) environment from a set of 2 or more projection matrices. This workflow is based on the popbio package (script: stoch.projection - Simulate stochastic growth from a sequence of matrices, Stubben, Milligan and Nantel, 2013) based on the The MATLAB code in Box 7.3 (Mo...

Created: 2014-07-30 | Last updated: 2014-08-14

Credits: User Maria Paula Balcazar-Vargas User Mikolaj Krzyzanowski User Jon Giddy User Francisco Quevedo User Gerard Oostermeijer

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Funded by: BioVeL, EPSRC, JISC, Microsoft

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