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Purpose:
The workflow maps a SNP (dbSNP id) to a gene (EntrezGene id).
Author comments:
The window for gene inclusion can be set using the set_width parameter. This workflow can be used together with other workflows in this pack: http://www.myexperiment.org/packs/282 for functional gene and SNP annotation and knowledge discovery.
Created: 2012-06-26 | Last updated: 2013-03-11
Credits: Kristina Hettne Harish Dharuri
Gene expression interpretation by the Glob... (1)
This workflow adds meaning to gene expresion values by performing a standard and a literature weighted Global Test. Gene expression is expected to be from Affymetrix microarrays, for which an RMA normalization and entrez Gene ID mapping/summation is performed.
Original workflow is by Dennis Leenheer, edits by Marco Roos. Scripts by Kristina Hettne, acknowledging Rob Jellier, Jelle Goeman, and Peter-Bram 't Hoen.
The workflow was created for the LUMC BioSemantics group, part of the Human Gen...
Created: 2011-04-26 | Last updated: 2011-04-26
Credits: Marco Roos