Log in
Register
Give us Feedback
Invite
Create New Pack
View All Packs
Packs allow you to collect different items together, like you might with a "wish list" or "shopping basket". You do this by linking to different things.
You can link to internal things (such as workflows, files and even other packs) as well as link to things outside of myExperiment.
Your packs can then be shared, tagged, discovered and discussed easily on myExperiment.
Top 50 tags for Packs [See All Tags]
- abstracts
- |
- affymetrix
- |
- african trypanosomiasis
- |
- AIDA
- |
- alignment
- |
- benchmarks
- |
- BioAID
- |
- bioinformatics
- |
- biorange_nl
- |
- BLAST
- |
- cdk-taverna
- |
- data-driven
- |
- demo
- |
- disease
- |
- e-science
- |
- ebi
- |
- example
- |
- genotype
- |
- graph
- |
- kegg
- |
- Kegg Pathways
- |
- KeggID
- |
- localworker
- |
- microarray
- |
- multiple sequence alignment
- |
- mygrid
- |
- ondex
- |
- ovtk
- |
- oxl
- |
- pathway
- |
- pathway-driven
- |
- pathways
- |
- phenotype
- |
- protein
- |
- protein annotation
- |
- pubmed
- |
- qtl
- |
- rdf
- |
- semantic_web
- |
- sleeping sickness
- |
- taverna
- |
- terms
- |
- test
- |
- text
- |
- text mining
- |
- text_mining
- |
- tutorial
- |
- uniprot
- |
- VL-e
- |
- workflow
|
Creator: |
Created: 13/12/09 @ 11:01:21
Title: Socialising e-Science
Speaker: David De Roure
Event: IEEE e-Science 2009
Event URL: http://www.escience2009.org/
Location: Oxford, UK
Date: Tuesday December 8, 2009
Formats: .ppt and .pptx
2 items in this pack Comments: 0 | Viewed: 31 times | Downloaded: 2 times This Pack has no tags! |
 View
 Download
|
|
Creator: |
Created: 13/12/09 @ 10:58:38
Title: Lessons from myExperiment: Two insights into emerging e-Research practice
Speaker: David De Roure
Event: UK e-Science All Hands Meeting 2009
Event URL: http://www.allhands.org.uk/
Location: Oxford, UK
Date: Monday December 7, 2009
Formats: .ppt and .pptx
2 items in this pack Comments: 0 | Viewed: 15 times | Downloaded: 1 time This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 10/12/09 @ 16:04:55 | Last updated: 18/12/09 @ 11:13:20
The Taverna team are happy to announce that Taverna 2.1 is now
available for download.
It includes many new features and bug fixes based on extensive
usability reviews and hours of testing.
2.1 truly is the next release up from the 1.7.x line.
2.1 features:
* Copy/paste, shortcuts, undo/redo, drag and drop
* An Animated workflow diagram
* Remembers added/removed services
* Secure Web services support
* Up-to-da...
12 items in this pack Comments: 0 | Viewed: 37 times | Downloaded: 94 times This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 16/11/09 @ 05:47:13
No description
2 items in this pack Comments: 0 | Viewed: 6 times | Downloaded: 0 times This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 14/11/09 @ 17:14:47
This is a pack containing all files for the collaborative team-building workflow exercise.
8 items in this pack Comments: 0 | Viewed: 24 times | Downloaded: 0 times Tags: |
View
|
|
Creator: |
Created: 21/10/09 @ 22:41:21
No description
2 items in this pack Comments: 0 | Viewed: 10 times | Downloaded: 0 times This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 16/10/09 @ 22:44:26 | Last updated: 16/10/09 @ 22:44:47
Title: Lessons from myExperiment: Research Objects for Data Intensive Research
Speaker: David De Roure
Event: Bio Microsoft e-Science 2009 Workshop
Event URL: http://research.microsoft.com/en-us/events/escience2009/
Location: Pittsburgh, US
Date: Friday, October 16, 2009
Formats: .ppt and .pptx
2 items in this pack Comments: 0 | Viewed: 18 times | Downloaded: 3 times This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 15/10/09 @ 14:56:51 | Last updated: 15/10/09 @ 15:08:51
Title: myExperiment Supporting social curation for workflows and protocols
Speaker: Carole Goble
Event: Bio IT World
Event URL: http://www.the-infoshop.com/conference/bio-itworld-euro09/conftracks_3.shtml
Location: Hannover, Germany
Date: Wednesday, October 7, 2009
Formats: .ppt
1 item in this pack Comments: 0 | Viewed: 14 times | Downloaded: 2 times This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 12/10/09 @ 22:09:36
TestCoin
0 items in this pack Comments: 0 | Viewed: 11 times | Downloaded: 3 times Tags: |
View
Download
|
|
Creator: |
Created: 11/09/09 @ 11:56:26 | Last updated: 11/09/09 @ 11:56:27
A pack consisting solely of liquid Awesomeness.
4 items in this pack Comments: 0 | Viewed: 20 times | Downloaded: 2 times This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 10/12/09 @ 16:04:55 | Last updated: 18/12/09 @ 11:13:20
The Taverna team are happy to announce that Taverna 2.1 is now
available for download.
It includes many new features and bug fixes based on extensive
usability reviews and hours of testing.
2.1 truly is the next release up from the 1.7.x line.
2.1 features:
* Copy/paste, shortcuts, undo/redo, drag and drop
* An Animated workflow diagram
* Remembers added/removed services
* Secure Web services support
* Up-to-da...
12 items in this pack Comments: 0 | Viewed: 37 times | Downloaded: 94 times This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 26/06/09 @ 13:59:44 | Last updated: 17/12/09 @ 17:08:42
No description
9 items in this pack Comments: 0 | Viewed: 129 times | Downloaded: 40 times Tags: |
View
Download
|
|
Creator: |
Created: 13/12/09 @ 11:01:21
Title: Socialising e-Science
Speaker: David De Roure
Event: IEEE e-Science 2009
Event URL: http://www.escience2009.org/
Location: Oxford, UK
Date: Tuesday December 8, 2009
Formats: .ppt and .pptx
2 items in this pack Comments: 0 | Viewed: 31 times | Downloaded: 2 times This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 13/12/09 @ 10:58:38
Title: Lessons from myExperiment: Two insights into emerging e-Research practice
Speaker: David De Roure
Event: UK e-Science All Hands Meeting 2009
Event URL: http://www.allhands.org.uk/
Location: Oxford, UK
Date: Monday December 7, 2009
Formats: .ppt and .pptx
2 items in this pack Comments: 0 | Viewed: 15 times | Downloaded: 1 time This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 16/11/09 @ 05:47:13
No description
2 items in this pack Comments: 0 | Viewed: 6 times | Downloaded: 0 times This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 14/11/09 @ 17:14:47
This is a pack containing all files for the collaborative team-building workflow exercise.
8 items in this pack Comments: 0 | Viewed: 24 times | Downloaded: 0 times Tags: |
View
|
|
Creator: |
Created: 21/10/09 @ 22:41:21
No description
2 items in this pack Comments: 0 | Viewed: 10 times | Downloaded: 0 times This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 16/10/09 @ 22:44:26 | Last updated: 16/10/09 @ 22:44:47
Title: Lessons from myExperiment: Research Objects for Data Intensive Research
Speaker: David De Roure
Event: Bio Microsoft e-Science 2009 Workshop
Event URL: http://research.microsoft.com/en-us/events/escience2009/
Location: Pittsburgh, US
Date: Friday, October 16, 2009
Formats: .ppt and .pptx
2 items in this pack Comments: 0 | Viewed: 18 times | Downloaded: 3 times This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 15/10/09 @ 14:56:51 | Last updated: 15/10/09 @ 15:08:51
Title: myExperiment Supporting social curation for workflows and protocols
Speaker: Carole Goble
Event: Bio IT World
Event URL: http://www.the-infoshop.com/conference/bio-itworld-euro09/conftracks_3.shtml
Location: Hannover, Germany
Date: Wednesday, October 7, 2009
Formats: .ppt
1 item in this pack Comments: 0 | Viewed: 14 times | Downloaded: 2 times This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 12/10/09 @ 22:09:36
TestCoin
0 items in this pack Comments: 0 | Viewed: 11 times | Downloaded: 3 times Tags: |
View
Download
|
|
Creator: |
Created: 17/07/08 @ 21:06:12 | Last updated: 26/06/09 @ 10:40:01
Everything to get started with Taverna 1.7 - latest version is 1.7.2
16 items in this pack Comments: 0 | Viewed: 288 times | Downloaded: 140 times Tags: |
View
Download
|
|
Creator: |
Created: 27/09/08 @ 17:57:39 | Last updated: 27/09/08 @ 18:23:50
A pack of examples of the calling of Taverna's localworkers.
The example workflows make extensive use of the default value mechanism for associating a value with a port of a service. An alternative set of workflows that use string constants to make the values more explicit is under development.
103 items in this pack Comments: 0 | Viewed: 193 times | Downloaded: 33 times Tags: |
View
Download
|
|
Creator: |
Created: 18/08/08 @ 17:58:31 | Last updated: 18/08/08 @ 17:58:32
Links to repository records, data files and Blog discussions for infra-red, hot stage microscopy, differential scanning calorimetry and x-ray crystallography studies on a small family of simple acetanilides
7 items in this pack Comments: 0 | Viewed: 185 times | Downloaded: 29 times Tags: |
View
Download
|
|
Creator: |
Created: 02/07/08 @ 22:31:12 | Last updated: 02/07/08 @ 23:11:22
... but were afraid to ask.
This is the pack to go to for all information about myExperiment and the people involved in this project!
9 items in this pack Comments: 0 | Viewed: 185 times | Downloaded: 36 times Tags: |
View
Download
|
|
Creator: |
Created: 02/07/08 @ 11:30:06
No description
3 items in this pack Comments: 0 | Viewed: 158 times | Downloaded: 31 times Tags: |
View
Download
|
|
Creator: |
Created: 29/09/08 @ 13:28:02 | Last updated: 29/09/08 @ 13:28:03
The pack contains a number of test workflows for kegg web service (and operations)
14 items in this pack Comments: 0 | Viewed: 154 times | Downloaded: 19 times Tags: |
View
Download
|
|
Creator: |
Created: 01/08/08 @ 11:33:03 | Last updated: 01/05/09 @ 17:38:06
Adaptive Information Disclosure Application toolbox:
AIDA web services for automated knowledge extraction and knowledge management
Documentation
9 items in this pack Comments: 0 | Viewed: 136 times | Downloaded: 11 times Tags: |
View
Download
|
|
Creator: |
Created: 26/06/09 @ 13:59:44 | Last updated: 17/12/09 @ 17:08:42
No description
9 items in this pack Comments: 0 | Viewed: 129 times | Downloaded: 40 times Tags: |
View
Download
|
|
Creator: |
Created: 12/07/08 @ 20:26:49 | Last updated: 20/07/08 @ 09:21:55
Please note that the workflows in this pack are not being maintained. For updated workflows check out http://www.myexperiment.org/users/43
77 items in this pack Comments: 0 | Viewed: 126 times | Downloaded: 11 times Tags: |
View
Download
|
|
Creator: |
Created: 08/10/08 @ 13:33:38 | Last updated: 22/10/08 @ 12:44:01
A set of example workflows for the Microsoft Trident workflow system
9 items in this pack Comments: 0 | Viewed: 121 times | Downloaded: 23 times Tags: |
View
Download
|
|
Creator: |
Created: 17/07/08 @ 21:06:12 | Last updated: 26/06/09 @ 10:40:01
Everything to get started with Taverna 1.7 - latest version is 1.7.2
16 items in this pack Comments: 0 | Viewed: 288 times | Downloaded: 140 times Tags: |
View
Download
|
|
Creator: |
Created: 10/12/09 @ 16:04:55 | Last updated: 18/12/09 @ 11:13:20
The Taverna team are happy to announce that Taverna 2.1 is now
available for download.
It includes many new features and bug fixes based on extensive
usability reviews and hours of testing.
2.1 truly is the next release up from the 1.7.x line.
2.1 features:
* Copy/paste, shortcuts, undo/redo, drag and drop
* An Animated workflow diagram
* Remembers added/removed services
* Secure Web services support
* Up-to-da...
12 items in this pack Comments: 0 | Viewed: 37 times | Downloaded: 94 times This Pack has no tags! |
View
Download
|
|
Creator: |
Created: 29/05/09 @ 13:16:31 | Last updated: 29/05/09 @ 13:29:38
Introduction
This is a pack for the first beta of Taverna 2.1
It includes a zip of Taverna 2.1 beta 1. The zip includes the executable of Taverna 2.1 beta 1, some example files, release notes and a list of known issues. If you have any comments or problems with the beta, then please post them as comments to this pack, or preferably to the taverna-hackers@lists.sourceforge.net
Welcome to Taverna 2.1 Beta 1 workbench
Due to user response to Taverna 2 workbench, major improveme...
2 items in this pack Comments: 2 | Viewed: 39 times | Downloaded: 53 times Tags: |
View
Download
|
|
Creator: |
Created: 26/06/09 @ 13:59:44 | Last updated: 17/12/09 @ 17:08:42
No description
9 items in this pack Comments: 0 | Viewed: 129 times | Downloaded: 40 times Tags: |
View
Download
|
|
Creator: |
Created: 02/07/08 @ 22:31:12 | Last updated: 02/07/08 @ 23:11:22
... but were afraid to ask.
This is the pack to go to for all information about myExperiment and the people involved in this project!
9 items in this pack Comments: 0 | Viewed: 185 times | Downloaded: 36 times Tags: |
View
Download
|
|
Creator: |
Created: 27/09/08 @ 17:57:39 | Last updated: 27/09/08 @ 18:23:50
A pack of examples of the calling of Taverna's localworkers.
The example workflows make extensive use of the default value mechanism for associating a value with a port of a service. An alternative set of workflows that use string constants to make the values more explicit is under development.
103 items in this pack Comments: 0 | Viewed: 193 times | Downloaded: 33 times Tags: |
View
Download
|
|
Creator: |
Created: 11/12/08 @ 12:02:48 | Last updated: 22/01/09 @ 09:06:27
This package contains all elements required to run the RShell use case "Mapping oligonucleotides to an assembly"
5 items in this pack Comments: 0 | Viewed: 108 times | Downloaded: 31 times Tags: |
View
Download
|
|
Creator: |
Created: 02/07/08 @ 11:30:06
No description
3 items in this pack Comments: 0 | Viewed: 158 times | Downloaded: 31 times Tags: |
View
Download
|
|
Creator: |
Created: 18/08/08 @ 17:58:31 | Last updated: 18/08/08 @ 17:58:32
Links to repository records, data files and Blog discussions for infra-red, hot stage microscopy, differential scanning calorimetry and x-ray crystallography studies on a small family of simple acetanilides
7 items in this pack Comments: 0 | Viewed: 185 times | Downloaded: 29 times Tags: |
View
Download
|
|
Creator: |
Created: 08/04/09 @ 13:14:54 | Last updated: 08/08/09 @ 18:57:59
It is increasingly common to combine Microarray and Quantitative Trait Loci data to aid the search for candidate genes responsible for phenotypic variation. Workflows provide a means of systematically processing large datasets, and represent a framework for the re-use and the explicit declaration of experimental methods. In this pack is a paper which describes the issues facing the manual analysis of microarray and QTL data for the discovery of candidate genes underlying complex phenotypes.&n...
20 items in this pack Comments: 0 | Viewed: 69 times | Downloaded: 26 times Tags: |
View
Download
|
|
Creator: |
Created: 02/07/08 @ 17:15:34
This pack contains useful info related to bio services.
6 items in this pack Comments: 0 | Viewed: 70 times | Downloaded: 8 times Tags: |
View
Download
|
|
Creator: |
Created: 17/07/08 @ 21:06:12 | Last updated: 26/06/09 @ 10:40:01
Everything to get started with Taverna 1.7 - latest version is 1.7.2
16 items in this pack Comments: 0 | Viewed: 288 times | Downloaded: 140 times Tags: |
View
Download
|
|
Creator: |
Created: 10/04/09 @ 13:41:56 | Last updated: 14/04/09 @ 08:34:12
This pack contains the materials used in the paper
De Roure, D., Goble, C., Aleksejevs, S., Bechhofer, S., Bhagat, J., Cruickshank, D., Fisher, P., Hull, D., Michaelides, D., Newman, D., Procter, R., Lin, Y. and Poschen, M. (2009) Towards Open Science: The myExperiment approach. Concurrency and Computation: Practice and Experience.
which has been submitted to the special issue of CCPE based on the Micorosfot e-Science workshop in Indianaopolis, December 2008.
The paper uses a pack by Pail ...
8 items in this pack Comments: 1 | Viewed: 37 times | Downloaded: 12 times Tags: |
View
Download
|
|
Creator: |
Created: 27/09/08 @ 19:52:17 | Last updated: 15/10/08 @ 08:55:46
Carole Goble's 2008 keynote talks that feature myExperiment, in PowerPoint 97-2003 format.
All myExperiment presentation can be found on the wiki on http://wiki.myexperiment.org/index.php/Presentations
4 items in this pack Comments: 0 | Viewed: 85 times | Downloaded: 18 times Tags: |
View
Download
|
|
Creator: |
Created: 18/08/08 @ 17:58:31 | Last updated: 18/08/08 @ 17:58:32
Links to repository records, data files and Blog discussions for infra-red, hot stage microscopy, differential scanning calorimetry and x-ray crystallography studies on a small family of simple acetanilides
7 items in this pack Comments: 0 | Viewed: 185 times | Downloaded: 29 times Tags: |
View
Download
|
|
Creator: |
Created: 29/09/08 @ 13:28:02 | Last updated: 29/09/08 @ 13:28:03
The pack contains a number of test workflows for kegg web service (and operations)
14 items in this pack Comments: 0 | Viewed: 154 times | Downloaded: 19 times Tags: |
View
Download
|
|
Creator: |
Created: 16/09/08 @ 11:43:57 | Last updated: 16/09/08 @ 17:12:35
A set of workflows that use the WikiPathways webservice.
5 items in this pack Comments: 0 | Viewed: 96 times | Downloaded: 12 times Tags: |
View
Download
 Add New Item |
|
Creator: |
Created: 27/09/08 @ 17:57:39 | Last updated: 27/09/08 @ 18:23:50
A pack of examples of the calling of Taverna's localworkers.
The example workflows make extensive use of the default value mechanism for associating a value with a port of a service. An alternative set of workflows that use string constants to make the values more explicit is under development.
103 items in this pack Comments: 0 | Viewed: 193 times | Downloaded: 33 times Tags: |
View
Download
|
|
Creator: |
Created: 12/07/08 @ 20:26:49 | Last updated: 20/07/08 @ 09:21:55
Please note that the workflows in this pack are not being maintained. For updated workflows check out http://www.myexperiment.org/users/43
77 items in this pack Comments: 0 | Viewed: 126 times | Downloaded: 11 times Tags: |
View
Download
|
|
Creator: |
Created: 13/07/08 @ 20:32:39 | Last updated: 20/07/08 @ 20:32:39
Please note that the workflows in this pack are not being maintained. For updated workflows check out http://www.myexperiment.org/users/221
66 items in this pack Comments: 0 | Viewed: 117 times | Downloaded: 6 times Tags: |
View
Download
|
|
Creator: |
Created: 17/12/08 @ 12:31:49 | Last updated: 08/03/09 @ 12:52:47
These workflows have been collected as potentially useful protocols for the sysmo consortium
21 items in this pack Comments: 0 | Viewed: 97 times | Downloaded: 14 times Tags: |
View
Download
|
|
Creator: |
Created: 08/04/09 @ 13:14:54 | Last updated: 08/08/09 @ 18:57:59
It is increasingly common to combine Microarray and Quantitative Trait Loci data to aid the search for candidate genes responsible for phenotypic variation. Workflows provide a means of systematically processing large datasets, and represent a framework for the re-use and the explicit declaration of experimental methods. In this pack is a paper which describes the issues facing the manual analysis of microarray and QTL data for the discovery of candidate genes underlying complex phenotypes.&n...
20 items in this pack Comments: 0 | Viewed: 69 times | Downloaded: 26 times Tags: |
View
Download
|
|
Creator: |
Created: 11/07/08 @ 01:24:33
The European Bioinformatics Institiute offers a wide range of services covering may biological anfd bioinformatics domains. This Pack col.lates a set of workflows that provide wrappers for web services developed, and maintained by the EBI.
19 items in this pack Comments: 0 | Viewed: 111 times | Downloaded: 14 times Tags: |
View
Download
|
|
Creator: |
Created: 11/08/09 @ 14:44:16 | Last updated: 11/08/09 @ 14:52:12
This pack is for investigating links between the genotype of an organisms to possible pathways. This constitutes half of the pathway-driven approach, genotype to pathway, and pathway to phenotype.
18 items in this pack Comments: 0 | Viewed: 42 times | Downloaded: 1 time Tags: |
View
Download
|
|
Creator: |
Created: 17/07/08 @ 21:06:12 | Last updated: 26/06/09 @ 10:40:01
Everything to get started with Taverna 1.7 - latest version is 1.7.2
16 items in this pack Comments: 0 | Viewed: 288 times | Downloaded: 140 times Tags: |
View
Download
|
|
Creator: |
Created: 10/08/09 @ 13:01:48 | Last updated: 11/08/09 @ 14:51:32
This pack contains a list of workflows and result files obtained from the analysis of candidate pathways believed to play a role in resistance to African Trypanosomiasis in the mouse model organism.
15 items in this pack Comments: 0 | Viewed: 71 times | Downloaded: 15 times Tags: |
View
Download
|
Copyright (c) 2007 - 2009 The University of Manchester and University of Southampton
