User: Simon Jupp

Name: Simon Jupp

Joined: Saturday 21 July 2007 @ 12:34:16 (GMT)

Last seen: Wednesday 11 January 2012 @ 14:32:21 (GMT)

Email (public): simon.jupp [at] manchester.ac.uk

Website: http://www.cs.man.ac.uk/~sjupp

Location: Not specified

14 Friends

3 Groups (admin)

2 Groups (member)

9 Workflows

1 Favourite

Simon Jupp has been credited 2 times

Simon Jupp has an average rating of:

0.0 / 5

(0 ratings in total)

for their items

Description/summary not set

Other contact details:

Not specified

Interests:

Not specified

Field/Industry: Not specified

Occupation/Role(s): Not specified

Organisation(s):

Not specified

Note: some items may not be visible to you, due to viewing permissions.

Contents (click to expand/contract)

Taverna 2

Original Uploader

Simon Jupp

miRNA GFF to entrez gene (v1)

Created: 26/01/11 @ 11:10:40 | Last updated: 11/01/12 @ 14:32:54

License: Creative Commons Attribution-No Derivative Works 3.0 Unported License

This workflow reads a GFF file of miRNA cooridinates and uses BioMart to search human ensemble genes for the gene that codes for the miRNA. The workflow returns a list of miRNAid, chromosome, start, stop, strand, entrez gene id, gene name, gene strand. Example input file here: ftp://mirbase.org/pub/mirbase/CURRENT/genomes/hsa.gff

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 32 times | Downloaded: 15 times

Tags (3):