Be User: Antoon Goderis

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Name: Antoon Goderis

Joined: Tuesday 31 July 2007 @ 17:23:00 (BST)

Last seen: Thursday 09 October 2008 @ 14:03:24 (BST)

Email (public): goderisa [at] cs.man.ac.uk

Website: http://www.cs.man.ac.uk/~goderisa

Location: Belgium

25 Friends

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3 Groups (member)

1 Blogs

5 Packs

71 Files

83 Workflows

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Antoon Goderis has been credited 7 times

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Forget Poirot, how about an infamous Belgian


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Field/Industry: Not specified

Occupation/Role(s): Working on the myExperiment project

Organisation(s):

University of Manchester

 

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Taverna 1

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Workflow AffyidToGeneAnnotationnoGOIDandPepstats.xml (v1)

Created: 12/07/08 @ 21:14:58 | Last updated: 19/07/08 @ 21:16:01

Credits: User Peter Li

License: Creative Commons Attribution-Share Alike 3.0 License

Untitled_17790_1
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Taverna 1

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Workflow DDBJ_BLAST.xml (v1)

Created: 12/07/08 @ 10:59:34 | Last updated: 19/07/08 @ 11:00:38

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

Ddbjblastn_23794_1
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Taverna 1

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Workflow blast.xml (v1)

Created: 12/07/08 @ 10:56:39 | Last updated: 19/07/08 @ 10:56:55

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

Ddbjblastn_23690_1
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Taverna 1

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Workflow blast_to_fasta.xml (v1)

Created: 12/07/08 @ 10:55:37 | Last updated: 19/07/08 @ 10:55:53

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

Ddbjblastn_2814_1
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Taverna 1

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Workflow protein2dna.xml (v1)

Created: 12/07/08 @ 10:54:28 | Last updated: 19/07/08 @ 10:54:44

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

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Taverna 1

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Workflow linking3.xml (v1)

Created: 12/07/08 @ 10:53:12 | Last updated: 19/07/08 @ 10:53:27

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

Links_between_embl_accession_number_to_medline_7457_1
This workflow links between a specified EMBL accesion number to corresponding identifiers in the MEDLINE database.

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Taverna 1

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Workflow genomic_sequence.xml (v1)

Created: 12/07/08 @ 10:52:14 | Last updated: 19/07/08 @ 10:52:34

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

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Taverna 1

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Workflow linking1.xml (v1)

Created: 12/07/08 @ 10:51:06 | Last updated: 19/07/08 @ 10:51:22

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

Untitled_1796_1
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Taverna 1

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Workflow interpro_scan_2.xml (v1)

Created: 12/07/08 @ 10:48:08 | Last updated: 19/07/08 @ 10:48:29

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

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Taverna 1

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Workflow interpro_scan_3.xml (v1)

Created: 12/07/08 @ 10:44:19 | Last updated: 19/07/08 @ 10:45:22

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

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Taverna 1

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Workflow metabolic.xml (v1)

Created: 12/07/08 @ 10:42:42 | Last updated: 19/07/08 @ 10:42:57

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

Affymetrix_probe_based_data_mining_workflow_31551_1
An example of how a more complex workflow can federate multiple resources to perform data mining. In this case a single input data item in the form of a probe set identifier is cross referenced to data sets in multiple locations to answer a kind of 'show me everything about this data' question.

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Taverna 1

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Workflow example.xml (v1)

Created: 12/07/08 @ 10:41:23 | Last updated: 19/07/08 @ 10:41:40

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

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Taverna 1

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Workflow affy_ids.xml (v1)

Created: 12/07/08 @ 10:40:22 | Last updated: 19/07/08 @ 10:40:43

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

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Taverna 1

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Workflow gene_ontology_diagram.xml (v1)

Created: 12/07/08 @ 10:39:09 | Last updated: 19/07/08 @ 10:39:32

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

Show_gene_ontology_term_context_27771_1
This workflow builds up a subgraph of the Gene Ontology (http://www.geneontology.org) to show the context for a supplied term or terms. It shows this context by colouring all ancestors of the term, all children and all siblings. By default, ancestors of the supplied term or terms are coloured orange, siblings purple and direct children teal. Other terms appear in the default wheat colour.

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Taverna 1

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Workflow getgenesbyspecies.xml (v1)

Created: 12/07/08 @ 10:37:57 | Last updated: 19/07/08 @ 10:38:21

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

Untitled_15557_1
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Taverna 1

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Workflow maxdBrowse_strings.xml (v1)

Created: 12/07/08 @ 10:35:17 | Last updated: 19/07/08 @ 10:36:46

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

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Taverna 1

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Workflow stringList.xml (v1)

Created: 12/07/08 @ 10:33:04 | Last updated: 19/07/08 @ 10:33:28

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

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Taverna 1

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Workflow BlastComparer.xml (v1)

Created: 12/07/08 @ 10:30:47 | Last updated: 19/07/08 @ 10:32:12

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

Blastp_with_simplified_results_returned_30372_1
Perform a blastp search on protein sequence and extract information based on the user input, e.g. a list of GI numbers. N.B. this workflow does not function correctly as it is designed for use with NCBI blast scripts. Some errors may occur. Please use two blast text file inputs for a secure result output.

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Taverna 1

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Workflow blast_GO.xml (v1)

Created: 12/07/08 @ 10:29:41 | Last updated: 19/07/08 @ 10:29:58

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

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Taverna 1

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Workflow gene_by_species.xml (v1)

Created: 12/07/08 @ 10:28:20 | Last updated: 19/07/08 @ 10:28:52

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

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Taverna 1

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Workflow protein_protein_interactions.xml (v1)

Created: 12/07/08 @ 10:27:05 | Last updated: 19/07/08 @ 10:27:18

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

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Taverna 1

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Workflow database_and_genes.xml (v1)

Created: 12/07/08 @ 10:26:05 | Last updated: 19/07/08 @ 10:26:26

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

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Taverna 1

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Workflow probeset_in_qtl.xml (v1)

Created: 12/07/08 @ 10:25:08 | Last updated: 19/07/08 @ 10:25:22

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

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Taverna 1

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Workflow genes_from_probesets.xml (v1)

Created: 12/07/08 @ 10:24:12 | Last updated: 19/07/08 @ 10:24:26

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

Untitled_25942_1
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Taverna 1

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Workflow bind-text.xml (v1)

Created: 12/07/08 @ 10:23:11 | Last updated: 19/07/08 @ 10:23:24

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 License

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Taverna 1

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