Log in
Register
Give us Feedback
InviteWorkflow Entry: NMR Spectrum similarity search witn SWI-Prolog in Bioclipse
| Citations (0) | Version History | Reviews (0) | Comments (0) |
 Version 1
(of 1)
|
Version created on:
13/03/10 @ 02:07:23
by:
Samuel Lampa
|
Revision comments 
Last edited on: 19/03/10 @ 13:15:43 by: Samuel Lampa
Title: NMR Spectrum similarity search witn SWI-Prolog in Bioclipse
Type: Bioclipse Scripting Language
Preview
(Click on the image to get the full size)
Description
With the SWI-Prolog (currently in experimental stage, and available from GitHub) plugin Prolog programs can be accessed inside Bioclipse’s scripting environment for querying and other processing of RDF triples.
The prolog code in this Bioclipse script performs a simple spectrum similarity search based on a list of peak shift values, for which it tries to find spectra that contain peaks values close to those values, within a certian limit (<0.3 ppm in this case).
The data which is used is data RDF:ized by Egon Willighagen (and available in Bio2RDF), from the NMRShiftDB.
Download
Run
Not available
Workflow Components
Not available
Workflow Type
Log in to add Tags
Shared with Groups (0)
None
Current:
5.0 / 5
(1 rating)
Log in to rate and see breakdown of ratings
Statistics
None
Earliest Version:
[1] - NMR Spectrum similarity search witn SWI-Prolog in Bioclipse
This Workflow only has one version.
Reviews
(0)
Other workflows that use similar services
(0)
There are no workflows in myExperiment that use similar services to this Workflow.
Linked Data
Non-Information Resource URI: http://www.myexperiment.org/workflows/1116
Alternative Formats
Copyright © 2007 - 2011 The University of Manchester and University of Southampton
No comments yet
Log in to make a comment