Log in
Register
Give us Feedback
InviteWorkflow Entry: XPath Pubmed Ids
| Citations (0) | Version History | Reviews (0) | Comments (0) |
 Version 1
(of 1)
|
Version created on:
23/03/11 @ 11:24:23
by:
Paul Fisher
|
Revision comments 
Last edited on: 23/03/11 @ 11:24:58 by: Paul Fisher
Title: XPath Pubmed Ids
Type: Taverna 2
Preview
(Click on the image to get the full size)
Download Scalable Diagram (SVG)
Description
This workflow takes in a search term (as used in the normal PubMed interface) and retrieves a list of PubMed ids in xml
Download
Run
Run this Workflow in the Taverna Workbench...
Option 1:
Copy and paste this link into File > 'Open workflow location...'
http://www.myexperiment.org/workflows/1975/download?version=1
[ More Info ]
Workflow Components
Authors (1)
Titles (2)
Descriptions (3)
Workflow Type
Log in to add Tags
Shared with Groups (1)
Current:
0.0 / 5
(0 ratings)
Log in to rate and see breakdown of ratings
Statistics
None
Earliest Version:
[1] - XPath Pubmed Ids
This Workflow only has one version.
Reviews
(0)
Other workflows that use similar services
(26)
Only the first 2 workflows that use similar services are shown. View all workflows that use these services.
|
Original Uploader |
Created: 08/02/11 @ 13:04:06 | Last updated: 10/02/11 @ 16:01:41
Credits:
Attributions:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow takes in a list of gene names and searches the PubMed database for corresponding articles. Any matches to the genes are then retrieved (abstracts only). These abstracts are then returned to the user.
Rating: 0.0 / 5 (0 ratings) | Versions: 4 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 43 times | Downloaded: 23 times Tags (30): |
 View
 Download (v4)
|
|
Original Uploader |
Created: 17/03/10 @ 10:53:02
Credits:
Attributions:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
Workflow takes in a text file of microRNAs from microCOSM (at the EBI) and outputs a list of KEGG pathway information, including genes in pathways and pathway abstracts from PubMed. The results can then be used in various text mining applications/workflows to rank the results against a given disease.Workflow takes in a file of microRNAs
Rating: 5.0 / 5 (1 rating) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 150 times | Downloaded: 2 times Tags (21): |
View
|
Linked Data
Non-Information Resource URI: http://www.myexperiment.org/workflows/1975
Alternative Formats
Copyright © 2007 - 2011 The University of Manchester and University of Southampton
No comments yet
Log in to make a comment