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InviteWorkflow Entry: EBI_PICR_Sequence_to_ID
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 Version 1
(of 1)
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Version created on:
08/06/08 @ 14:03:07
by:
Hamish McWilliam
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Revision comments 
Title: EBI_PICR_Sequence_to_ID
Type: Taverna 1
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Description
Map a protein sequence to the known identifiers of identical sequences.
Uses the EBI's PICR web service (see http://www.ebi.ac.uk/Tools/picr/) to perform the mapping.
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http://www.myexperiment.org/workflows/236/download?version=1
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|
Original Uploader |
Created: 14/10/11 @ 17:45:28 | Last updated: 27/10/11 @ 10:39:21
Credits:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
Get homologous from NCBI homoloGene for a lsit of UniProt protein accession. Use PICR to convert UniProt to RefSeq, get homologous from homoloGene and convert RefSeq results to UniProt. Be patient, the workflows has to bring a file around 11Mb. ftp://ftp.ncbi.nlm.nih.gov/pub/HomoloGene/README
Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 11 times | Downloaded: 4 times Tags (3): |
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|
Original Uploader |
Created: 14/10/11 @ 17:26:32 | Last updated: 14/10/11 @ 17:26:28
Credits:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
Get homologous from NCBI homoloGene for one UniProt protein accession. Use PICR to convert UniProt to RefSeq, get homologous from homoloGene and convert RefSeq results to UniProt. Be patient, the workflows has to bring a file around 11Mb. ftp://ftp.ncbi.nlm.nih.gov/pub/HomoloGene/README
Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 18 times | Downloaded: 4 times Tags (3): |
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Linked Data
Non-Information Resource URI: http://www.myexperiment.org/workflows/236
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Copyright © 2007 - 2011 The University of Manchester and University of Southampton
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