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InviteWorkflow Entry: EBI_OLS_TermInfo
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 Version 1
(of 1)
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Version created on:
09/07/08 @ 05:36:40
by:
Hamish McWilliam
|
Revision comments 
Title: EBI_OLS_TermInfo
Type: Taverna 1
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Description
Get details of an ontology term given its identifer.
This workflow uses the EBI's Ontology Lookup Service (OLS) to get the details of the ontology term. The OLS suports a wide range of biological and bioinformatic ontologies. See http://www.ebi.ac.uk/ontology-lookup/ for more information.
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[1] - EBI_OLS_TermInfo
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Other workflows that use similar services
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|
Original Uploader |
Created: 08/06/11 @ 15:24:57 | Last updated: 08/06/11 @ 15:37:27
Credits:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow accepts an url of a fasta file as input and performs an NCBI blastn at the EBI against the bacteria database and an NCBI blastx against the uniref90 database.
From the blast results of the blastx the hit with the lowest e-value is taken and the GO is returned.
Output is blastx and blastn results and GO from the first hit of the blastx.
Based on Katy Wolstencroft & Hamish McWilliam EBI_NCBI_BLAST http://www.myexperiment.org/workflows/1765.html
Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 23 times | Downloaded: 8 times Tags (1): |
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Original Uploader |
Created: 29/03/11 @ 11:16:17 | Last updated: 30/03/11 @ 16:09:01
Credits:
Attributions:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
Takes in a tab-delimited BLAST file and finds additional information about the target proteins from KEGG, Gene Ontology, Interpro and PubMed.
Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 45 times | Downloaded: 20 times Tags (6): |
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Linked Data
Non-Information Resource URI: http://www.myexperiment.org/workflows/250
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Copyright © 2007 - 2011 The University of Manchester and University of Southampton
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