Concept Profile Generation Pipeline

Created: 2014-04-30 19:14:51      Last updated: 2014-06-15 17:55:11


Have MySQL installed with a database called mydb or please create one. Have mysql-connector-java-5.1.28-bin.jar or better placed in the local JAR files.

Have Peregrine indexer installed locally and give it the correct path in the component named "Indexer_tool" Download the Peregrine SKOS CLI from: Install LVG2013Lite. See: Copy properties file from Change the and normalizer.lvg.binaryCache properties to point to the LVG installation path.

If using a Windows machine please install cygwin. Set cygwin in the $PATH of the environment variabale. Go to taverna File --> preferences --> Tool invocation --> Edit defaul local --> write in Shell: C:\Windows\system32\cmd.exe /c and save that.

Have JAVA_HOME C:\Program Files\jdk 1.7.0 in environment variabale.

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