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AppendToFile

Workflow Entry: AppendToFile

Created at: 11/11/08 @ 15:11:38 Last updated: 11/11/08 @ 15:14:43

Version 2 (latest) (of 2)

Version created on: 11/11/08 @ 15:11:38 by: Wassinki | Revision comments Expand

Last edited on: 11/11/08 @ 15:14:43 by: Wassinki

Title: AppendToFile

Type: Taverna 1

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Description

Processor to add content to a (existing) file. The content is added to the end of the file.

The inputs:
Filename: the file name of a file, if the file does not exists, a new file is added
Content: the string to append
NewLine [default = true]: if true, a newline is added to the end of the line (useful if you want to add a record each time)

The processor supports Multi-Threading since version 2.

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Option 1:

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Note: you need to have both the WHIP Launcher and the Taverna myExperiment/WHIP plugin installed on your machine for this to work. See here for information.

Option 2:

Copy and paste this link into File > 'Open workflow location...'
http://www.myexperiment.org/workflows/560/download?version=2
[ More Info Expand ]

Workflow Components

Inputs (0)

Processors (1)

Name	Type	Description
AppendToFile	beanshell	Processor to add content to a (existing) file. The content is added to the end of the file. The inputs: Filename: the file name of a file, if the file does not exists, a new file is added Content: the string to append NewLine [default = true]: if true, a newline is added to the end of the line (useful if you want to add a record each time)

Beanshells (1)

Name	Description	Inputs	Outputs
AppendToFile	Processor to add content to a (existing) file. The content is added to the end of the file. The inputs: Filename: the file name of a file, if the file does not exists, a new file is added Content: the string to append NewLine [default = true]: if true, a newline is added to the end of the line (useful if you want to add a record each time)	Filename Content NewLine

Outputs (0)

Links (0)

Coordinations (0)

Information Workflow Type

Taverna 1

Information Original Uploader

Wassinki

Information License

All versions of this Workflow are licensed under:

Information Credits (1)

(People/Groups)

Wassinki

Information Attributions (0)

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None

Information Tags (4)

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Information Ratings (0)

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Information Attributed By (1)

(Workflows/Files)

Mapping OligoNucleotides to an assembly

Information Favourited By (1)

Giovanni Dall'Olio

Information Statistics

960 viewings

732 downloads

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Citations (0)

None

Version History

Earliest Version:
[1] - AppendToFile

Created on: Monday 10 November 2008 @ 16:36:53 (GMT)

Created by: Wassinki

Last edited on: Monday 10 November 2008 @ 16:40:53 (GMT)

Last edited by: Wassinki

Revision comments:

None

Latest Version:
[2] - AppendToFile

Created on: Tuesday 11 November 2008 @ 15:11:38 (GMT)

Created by: Wassinki

Last edited on: Tuesday 11 November 2008 @ 15:14:43 (GMT)

Last edited by: Wassinki

Revision comments:

This version supports multi-threading. Only one thread is able to append content to a file

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Comments (2)

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Giovanni Dall'Olio

It seems a very basic processor to be used frequently. Thank you for posting it :)

Have you tested with any particular file/case?

Wassinki

Hello,

I have used this one in a very large workflow that takes 5 hours to run. It saves all intermediate results to restore the workflow run in case of a crash.

See http://www.myexperiment.org/workflows/603

Ingo