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Bio2rdf: Bind search, rdfise and load demo

Workflow Entry: Bio2rdf: Bind search, rdfise and load demo

Created at: 19/02/09 @ 05:07:30 Last updated: 19/02/09 @ 05:39:51

| License | Credits (1) | Attributions (0) | Tags (4) | Featured in Packs (0) | Ratings (0) | Attributed By (0) | Favourited By (0) |
| Citations (0) | Version History | Reviews (0) | Comments (0) |

Information

Version 1 (of 1)

Version created on: 19/02/09 @ 05:07:30 by: Francois Belleau | Revision comments Expand

Last edited on: 19/02/09 @ 05:39:52 by: Francois Belleau

Title: Bio2rdf: Bind search, rdfise and load demo

Type: Taverna 2

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Description

INSERT IN GRAPH <http://localhost/sesame/mem_rdf_db> {
   CONSTRUCT { ?s, ?p, ?o . }
   FROM <http://soap.bind.ca/wsdl/bind.wsdl>
   WHERE {
       SELECT ?s
       FROM <http://soap.bind.ca/wsdl/bind.wsdl>
       WHERE {
            ?s, ?p, ?o .
           FILTER ( regex(?o, "query")) .
   }
   , ?p, ?o . }
}

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http://www.myexperiment.org/workflows/654/download?version=1
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Workflow Components

Information

Authors (1)

Information

Titles (3)

Information

Descriptions (2)

Inputs (0)

Processors (8)

Beanshells (6)

Name	Description	Inputs	Outputs
Split_bmuri		bmuri	id
Bind_rdfiser		string	triples
Sesame_upload_triples		triples repository input_format	html
Split_string_into_string_list		string	split
Filter_list_of_strings_extracting_msg		stringlist	filteredlist
Concatenate_two_strings		string1 string2	output

Outputs (3)

Datalinks (9)

Coordinations (0)

Information Workflow Type

Information Original Uploader

1443?size=60x60

Francois Belleau

Information License

All versions of this Workflow are licensed under:

Information Credits (1)

(People/Groups)

Francois Belleau

Information Attributions (0)

(Workflows/Files)

None

Information Tags (4)

Original Uploader tags

bind
|
bio2rdf
|
demo
|
search

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Information Shared with Groups (0)

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Information Featured In Packs (0)

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Information Ratings (0)

Current:

0.0 / 5

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Information Attributed By (0)

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None

Information Favourited By (0)

No one

Information Statistics

421 viewings

728 downloads

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Citations (0)

None

Version History

Earliest Version:
[1] - Bio2rdf: Bind search, rdfise and load demo

Created on: Thursday 19 February 2009 @ 05:07:30 (GMT)

Created by: Francois Belleau

Last edited on: Thursday 19 February 2009 @ 05:39:52 (GMT)

Last edited by: Francois Belleau

Revision comments:

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This Workflow only has one version.

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Other workflows that use similar services (5)

Only the first 2 workflows that use similar services are shown. View all workflows that use these services.

Taverna 2

Original Uploader

1443?size=60x60

Francois Belleau

Bio2RDF: Rdfiser for Bind protein interaction. (v1)

Created: 19/02/09 @ 05:10:23 | Last updated: 19/02/09 @ 05:24:29

Credits: Francois Belleau

License: Creative Commons Attribution-Share Alike 3.0 Unported License

CONSTRUCT{ <bmuri>, ?p, ?o . } FROM <http://soap.bind.ca/wsdl/bind.wsdl> WHERE { <bmuri>, ?p, ?o . }

Rating: 5.0 / 5 (1 rating) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 57 times | Downloaded: 28 times

Tags (6):

bind
|
bio2rdf
|
database
|
protein
|
rdf
|
rdfiser

View

Download (v1)

Taverna 2

Original Uploader

1443?size=60x60

Francois Belleau

Bio2RDF: Bind fulltext search service returning bmuris. (v1)

Created: 19/02/09 @ 05:18:44 | Last updated: 19/02/09 @ 05:26:17

Credits: Francois Belleau

License: Creative Commons Attribution-Share Alike 3.0 Unported License

SELECT ?s FROM <http://soap.bind.ca/wsdl/bind.wsdl> WHERE { ?s, ?p, ?o . FILTER ( regex(?o, "query")) . }

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 33 times | Downloaded: 21 times

Tags (3):

View

Download (v1)

Linked Data

Non-Information Resource URI: http://www.myexperiment.org/workflows/654

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