Log in
Register
Give us Feedback
InviteWorkflow Entry: kegg_gene_to_swissprot_identifier
| Citations (0) | Version History | Reviews (0) | Comments (1) |
 Version 1
(of 1)
|
Version created on:
27/11/07 @ 11:53:11
by:
Sirisha Gollapudi
|
Revision comments 
Last edited on: 28/11/07 @ 12:58:38 by: Sirisha Gollapudi
Title: kegg_gene_to_swissprot_identifier
Type: Taverna 1
Preview
(Click on the image to get the full size)
Download Scalable Diagram (SVG)
Description
Takes a KEGG gene identifier, e.g. sce:YAL038W (yeast pyruvate kinase) and converts to the corresponding Swissprot identifier.
Download
Run
Run this Workflow in the Taverna Workbench...
Option 1:
Launch in TavernaNote: you need to have both the WHIP Launcher and the Taverna myExperiment/WHIP plugin installed on your machine for this to work. See here for information.
Option 2:
Copy and paste this link into File > 'Open workflow location...'
http://www.myexperiment.org/workflows/98/download?version=1
[ More Info ]
Workflow Components
Workflow Type
Log in to add Tags
Shared with Groups (0)
None
Current:
0.0 / 5
(0 ratings)
Log in to rate and see breakdown of ratings
Statistics
None
Earliest Version:
[1] - kegg_gene_to_swissprot_identifier
This Workflow only has one version.
Reviews
(0)
Other workflows that use similar services
(91)
Only the first 2 workflows that use similar services are shown. View all workflows that use these services.
|
Original Uploader |
Created: 12/01/12 @ 09:46:31 | Last updated: 12/01/12 @ 14:54:37
Credits:
Attributions:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow accepts a list of genbank gene identifiers and returns descriptions of gene functions and a list of all pathways each gene is involved in, according to the KEGG database.
Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 6 times | Downloaded: 8 times Tags (8): |
 View
 Download (v2)
|
|
Original Uploader |
Created: 26/12/08 @ 07:52:41 | Last updated: 26/12/08 @ 07:53:11
Credits:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
No description
Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 75 times | Downloaded: 13 times This Workflow has no tags! |
View
Download (v1)
|
Linked Data
Non-Information Resource URI: http://www.myexperiment.org/workflows/98
Alternative Formats
Copyright © 2007 - 2011 The University of Manchester and University of Southampton
Log in to make a comment
Good idea on all the immediate steps. There is also a biomoby service called "convertKeggGeneId2ProtId" that can do the same thing without all the grunt work of having to parse the data.