Workflow Entry: Triplify UniProt database external reference [myexperiment:uniprot_xref_namespace2rdf]

Created at: 01/12/09 @ 04:08:08 Last updated: 01/12/09 @ 04:09:39

Version 2 (latest) (of 2)

Version created on: 01/12/09 @ 04:08:08 by: Francois Belleau | Revision comments Expand

Last edited on: 01/12/09 @ 04:09:40 by: Francois Belleau

Title: Triplify UniProt database external reference [myexperiment:uniprot_xref_namespace2rdf]

Type: Taverna 2

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Authors (1)

Titles (1)

Descriptions (6)

Inputs (0)

Processors (8)

Name	Type	Description
uniprot_dbxref_url	stringconstant
AC_begin	stringconstant
uniprot_build_ntriples	beanshell
Merge_String_List_to_a_String	localworker
Split_string_into_string_list_by_regular_expression	localworker
Get_Web_Page_from_URL	localworker
UniProt_ntriples	beanshell
Concatenate_two_strings	localworker

Beanshells (2)

Name	Description	Inputs	Outputs
uniprot_build_ntriples		in	namespace ntriples
UniProt_ntriples			ntriples

Outputs (3)

Name	Description
uniprot_xref_namespace_ntriples
namespace_list
url

Datalinks (10)

Source	Sink
Split_string_into_string_list_by_regular_expression:split	uniprot_build_ntriples:in
Concatenate_two_strings:output	Merge_String_List_to_a_String:stringlist
AC_begin:value	Split_string_into_string_list_by_regular_expression:regex
Get_Web_Page_from_URL:contents	Split_string_into_string_list_by_regular_expression:string
uniprot_dbxref_url:value	Get_Web_Page_from_URL:url
UniProt_ntriples:ntriples	Concatenate_two_strings:string1
uniprot_build_ntriples:ntriples	Concatenate_two_strings:string2
Merge_String_List_to_a_String:concatenated	uniprot_xref_namespace_ntriples
uniprot_build_ntriples:namespace	namespace_list
uniprot_dbxref_url:value	url