Workflows

Basic Call of HELIO Coordinate Transformat... (1)

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Transforms an input VOTable Coordinate set to a specified output VOTable Coordinate set. This workflow performs some remote computation and may take some time to complete.

Created: 2011-11-08 | Last updated: 2011-11-08

Credits: Anja Le Blanc

A heuristic measure for detecting undesire... (2)

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The workflow takes TIFF image instances as input, applies a list of JP2 compression parameter values, executes OCR using an open source OCR engine, evaluates the results, and creates a diagram visualising the results. Dependencies on external tools for the tool service components: Tesseract ImageMagick Kakadu Gnuplot Dependencies on external Java libraries of beanshells: Apache commons lang

Created: 2012-02-06 | Last updated: 2012-03-09

Credits: Sven

EB-eye getAllResultIds and WSDbfetch fetch... (1)

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Get database entries for a query using EB-eye to perform the initial query against the database to get entry identifiers and using the identifiers with WSDbfetch to retrieve the entry data in the desired format. Note: this particular implementation is not suitable for queries which return large numbers of results.

Created: 2013-03-28

Credits: Hamish McWilliam

digital-preservation-migration-image-image... (1)

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Converts any ImageMagick supported image format to TIFF

Created: 2014-11-06

digital-preservation-migration-image-gimp-... (1)

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Converts PNG to TIFF

Created: 2014-11-06

digital-preservation-migration-image-graph... (1)

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Converts any GraphicsMagick supported image format to TIFF

Created: 2014-11-06

NCBI BLAST (SOAP) (1)

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Perform a BLAST search using the EMBL-EBI’s NCBI BLAST (SOAP) service (see http://www.ebi.ac.uk/Tools/webservices/services/sss/ncbi_blast_soap). The query sequence, database to search and BLAST program to use are inputs, the other parameters for the search are allowed to default.

Created: 2010-11-29 | Last updated: 2013-03-28

Attributions: EBI_NCBI_BLAST NCBI BLAST (SOAP)

InterProScan (SOAP) (1)

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Perform an InterProScan search using the EMBL-EBI’s InterProScan (SOAP) service (see http://www.ebi.ac.uk/Tools/webservices/services/pfa/iprscan_soap). The query sequence to use is the input, the other parameters for the search are allowed to default.

Created: 2010-12-03 | Last updated: 2013-03-28

Attributions: EBI_InterProScan