Gb User: Paolo

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Name: Paolo

Joined: Wednesday 30 January 2008 15:25:36 (UTC)

Last seen: Wednesday 23 October 2013 16:11:28 (UTC)

Email (public): pmissier [at] cs.man.ac.uk

Website: http://www.cs.man.ac.uk/~pmissier/

Location: Manchester, United Kingdom

Paolo has been credited 23 times

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Interests:

Data and metadata management, data and information quality

Field/Industry: Not specified

Occupation/Role(s): Not specified

Organisation(s):

University of Manchester, School of Computer Science

 

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Blob input to eSC-T-1 workflow

Created: 2011-02-25 09:00:00 | Last updated: 2011-02-25 09:00:01

Credits: User Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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File type: XML

Comments: 0 | Viewed: 15 times | Downloaded: 11 times

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Blob The Janus provenance ontology

Created: 2010-07-08 18:35:49 | Last updated: 2010-07-08 18:35:50

Credits: User Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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File type: Trident (Package)

Comments: 0 | Viewed: 26 times | Downloaded: 27 times

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Blob OPM graph in RDF format for PC1_B workflow with same...

Created: 2010-06-25 01:10:59

Credits: User Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

this version of the OPM graph includes URLs to each of the data files, which have been uploaded to an ftp server so they can be shared.

File type: RDF data

Comments: 0 | Viewed: 27 times | Downloaded: 30 times

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Blob OPM graph in RDF format for PC1_B workflow (mockup)

Created: 2010-06-21 16:18:25 | Last updated: 2010-06-21 16:18:26

Credits: User Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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File type: RDF data

Comments: 0 | Viewed: 24 times | Downloaded: 19 times

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Blob OPM graph in RDF format for PC1_A workflow (mockup)

Created: 2010-06-21 16:16:53 | Last updated: 2010-06-21 16:16:54

Credits: User Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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File type: RDF data

Comments: 0 | Viewed: 77 times | Downloaded: 50 times

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Blob OPM provenance graph for one run of the workflow

Created: 2010-06-21 16:15:21

Credits: User Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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File type: RDF data

Comments: 0 | Viewed: 29 times | Downloaded: 32 times

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Blob OPM graph in XML format for PC1_B workflow (mockup)

Created: 2010-06-21 09:50:57

Credits: User Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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File type: XML

Comments: 0 | Viewed: 18 times | Downloaded: 12 times

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Blob OPM graph in XML format for PC1_A workflow (mockup)

Created: 2010-06-21 09:45:21 | Last updated: 2010-06-21 09:45:22

Credits: User Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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File type: XML

Comments: 0 | Viewed: 15 times | Downloaded: 12 times

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Blob Janus provenance graph (RDF)

Created: 2010-06-08 23:02:53 | Last updated: 2010-06-09 22:48:46

Credits: User Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

RDF instance file containing the entire provenance graph for once run of the PC1 mockup workflow. The RDF graph complies with the Janus ontology, which can be viewed here Caveat: implementation still under testing, file may still contain bugs  

File type: RDF data

Comments: 0 | Viewed: 56 times | Downloaded: 36 times

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Blob test inputs for mockup version of PC1 workflow

Created: 2010-05-28 07:24:31 | Last updated: 2010-05-28 07:25:55

Credits: User Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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File type: XML

Comments: 0 | Viewed: 29 times | Downloaded: 22 times

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Blob EDBT Provenance talk presentation - PFD version

Created: 2010-03-26 14:01:00 | Last updated: 2010-03-26 14:02:09

Credits: User Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

PDF version -- see related pack for Native Keynote link to paper link to conference proceedings  

File type: application/unknown

Comments: 0 | Viewed: 40 times | Downloaded: 22 times

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Blob GeoClouds workshop talk

Created: 2009-09-18 13:58:14

Credits: User Paolo User David De Roure User Carole Goble User David R Newman

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Indianapolis, IN, Sept 17, 2009 www.dataandsearch.org/dsi/events/geoclouds.html

File type: application/x-zip

Comments: 0 | Viewed: 45 times | Downloaded: 19 times

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Blob Provenance DB dump to be used as a reference

Created: 2009-09-10 14:18:23

Credits: User Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

this dump contains the provenance for 2 runs of this workflow: www.myexperiment.org/workflows/908

File type: Chemistry Plan

Comments: 0 | Viewed: 49 times | Downloaded: 31 times

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Workflow

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Workflow Provenance Challenge 1 workflow part B -- ... (1)

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Created: 2010-06-21 | Last updated: 2010-06-21

Credits: User Paolo

Workflow

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Workflow Provenance Challenge 1 workflow part A -- ... (1)

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Created: 2010-06-21 | Last updated: 2010-06-21

Credits: User Paolo

Workflow

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Workflow Provenance Challenge 1 workflow -- mockup ... (1)

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simulates the image processing for the PC1 workflow using beanshell that simply track test strings an image is a pair (header, image) specified as a list of depth 1: [header,image] so each processor with image input takes an input list. Note that the processors are designed to operate on single images (except softmean that operates on a list of images), but because the initial input is a list of images, all are processed by implicit iteration.

Created: 2010-05-28

Credits: User Paolo

Workflow

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Workflow myFirstLinearDataflow (1)

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Created: 2010-04-12

Credits: User Paolo

Workflow

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Workflow example of a 2-deep nested workflow (1)

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used for testing provenance as well as experimenting with Scufl2 specfications

Created: 2009-09-11

Credits: User Paolo

Workflow

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Workflow Workflow for provenance testing -- example 1 (1)

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this simply includes a few beanshells and is used for testing our provenance capture and query algorithms

Created: 2009-09-10

Credits: User Paolo

Workflow

Workflow EBI_InterProScan for Taverna 2 (2)

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Perform an InterProScan analysis of a protein sequence using the EBI’s WSInterProScan service (see http://www.ebi.ac.uk/Tools/webservices/services/interproscan). The input sequence to use and the user e-mail address are inputs, the other parameters for the analysis (see Job_params) are allowed to default. InterProScan searches a protein sequence against the protein family and domain signature databases integrated into InterPro (see http://www.ebi.ac.uk/interpro/). A set of matches to the s...

Created: 2010-01-26 | Last updated: 2010-01-26

Credits: User Stian Soiland-Reyes User Paolo User Katy Wolstencroft User Hamish McWilliam

Attributions: Workflow EBI InterproScan T2 Workflow EBI_InterProScan

Workflow

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Workflow KEGG Gene IDs to KEGG Pathways (1)

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this is a simplified version of Paul's workflow (linked?) that is designed to be provenance-friendly

Created: 2009-06-04 | Last updated: 2010-01-07

Credits: User Paolo

Attributions: Workflow Pathways and Gene annotations for QTL region

Workflow

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Workflow Taverna rendering of the PAN-STARRS workfl... (1)

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Example inputs: CSVRootPath = /Users/paolo/Documents/myGRID/OPM/PC3/SampleData/J062941 JobID:J062941  

Created: 2009-04-30

Credits: User Paolo

Workflow

Workflow EBI_InterProScan for Taverna 2 (2)

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Perform an InterProScan analysis of a protein sequence using the EBI’s WSInterProScan service (see http://www.ebi.ac.uk/Tools/webservices/services/interproscan). The input sequence to use and the user e-mail address are inputs, the other parameters for the analysis (see Job_params) are allowed to default. InterProScan searches a protein sequence against the protein family and domain signature databases integrated into InterPro (see http://www.ebi.ac.uk/interpro/). A set of matches to t...

Created: 2010-01-26 | Last updated: 2010-11-24

Credits: User Stian Soiland-Reyes User Katy Wolstencroft User Paolo User Hamish McWilliam

Attributions: Workflow EBI_InterProScan for Taverna 2 Workflow EBI InterproScan T2 Workflow EBI_InterProScan Workflow EBI InterProScan

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Linked Data

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