User: wabi

Name: wabi

Joined: Wednesday 12 May 2010 07:20:41 (UTC)

Last seen: Friday 12 November 2010 10:29:03 (UTC)

Email (public): Not specified

Website: http://xml.nig.ac.jp/

Location: Mishima, Japan

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Workflow

Taverna 2

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wabi

BLAST workflow (1)

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You can get three BLAST results against DDBJ, swiss-prot and PDB by using accession number of DDBJ.

Created: 2010-05-13 | Last updated: 2010-05-13

Credits: wabi

Workflow

Taverna 2

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wabi

BLAST-ClustalW workflow (1)

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Execute blastn against DDBJ database with a given DNA sequence and compare the alignment regions of high similar sequences by using ClustalW.

Created: 2010-05-13 | Last updated: 2010-05-13

Credits: wabi

Workflow

Taverna 2

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wabi

Virus genome extraction workflow (1)

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Retrieve genome entries which agree with the following conditions regarding the Definition item of entries from both VRL and PHG division in DDBJ. Includes "complete sequence" or includes "segment" and "complete sequence" Not include "TPA:" and "nearly complete"

Created: 2010-05-13 | Last updated: 2010-05-13

Credits: wabi

Workflow

Taverna 2

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wabi

Nucleotide frequency workflow (2)

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Created: 2010-05-13 | Last updated: 2010-11-12

Credits: wabi

Workflow

Taverna 2

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wabi

Homology workflow (1)

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There are many kinds of DNA data derived from many species in DDBJ. It makes possible to carry out the comparative study of genes of multiple species. The workflow provides a list of species and their genes that are similar to a human gene in response to a name of the human gene.

Created: 2010-05-12 | Last updated: 2010-05-12

Credits: wabi

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