User: Magnus Palmblad

Name: Magnus Palmblad

Joined: Wednesday 25 April 2012 11:51:29 (UTC)

Last seen: Wednesday 30 January 2019 10:30:32 (UTC)

Email (public): n.m.palmblad [at] lumc.nl

Website: http://www.ms-utils.org

Location: Leiden, Netherlands

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Associate Professor at the Center for Proteomics and Metabolomics at the Leiden University Medical Center

Interests:

Mass spectrometry, proteomics, bioinformatics, algorithms, large-scale biology, evolution

Field/Industry: Biomedical

Occupation/Role(s): Principal Investigator

Organisation(s):

American Society for Mass Spectrometry

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Long list of stopwords

Created: 2015-12-07 14:46:51

Credits: Magnus Palmblad

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This is a longer list of unspecific stopwords frequently appearing in scientific abstracts. This is an extended version of the "Long Stopword List" on the Ranks NL Website (http://www.ranks.nl/stopwords).

File type: Excel workbook

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Example results from the UniProt Protein Protein Net...

Created: 2015-12-04 14:50:06

Credits: Magnus Palmblad Yassene

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Example results from the UniProt Protein Protein Network workflow (http://www.myexperiment.org/workflows/4778.html) on Apolipoprotein A-I (P02647). The purpose of the igraph graph is to check that the workflow ran OK. For further exploration and visualization of the network, one of the output files can be opened in Cytoscape or similar tool.

File type: PNG image

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Former countries

Created: 2015-05-05 12:43:01

Credits: Magnus Palmblad Arzu Tugce Guler

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File for mapping former countries to successor states using the ISO 3166 standards.

File type: Excel workbook

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ISO 3166-1 and ISO 3166-3

Created: 2015-05-05 12:39:15

Credits: Magnus Palmblad

License: Creative Commons Attribution-Share Alike 3.0 Unported License

The ISO 3166-1 and ISO 3166-3 country codes

File type: Excel workbook

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LabVIEW Equivalent of Tutorial 1 Workflow

Created: 2014-05-05 11:39:35

Credits: Magnus Palmblad

Attributions: Tutorial 1 Workflow

License: Creative Commons Attribution-Share Alike 3.0 Unported License

What is it?This is a LabVIEW equivalent of the 2014 LUMC Taverna Tutorial (a Taverna version is available at http://www.myexperiment.org/workflows/4254.html) created by Dr. David Kilgour. The workflow is an executable that only requires the free (gratis) LabVIEW Run-Time Engine. Why do we share this?The workflows demonstrates the capabilities in Taverna and LabVIEW, and may be of assistance for people who are familiar with one system who wish to get an idea about the other. This is the f...

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rt3.c

Created: 2012-09-03 10:36:54 | Last updated: 2012-09-03 10:42:13

Credits: Magnus Palmblad

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Linear retention time prediction training rt, version 3.0 with improved command-line interface and format options.