File Entry: Very simple script to fix pathway commons biopax files

Created: 2009-11-04 11:05:46
Information Version 1 (of 1)

Version created on: 2009-11-04 11:05:46


Information Description

This very simple script (it only replace one type of ID!) will fix BioPAX files coming from PathwayCommons.

In this files, rdf:ID is used instead of rdf:about, and since these files contains repetition, this results in an error in strict parsers.

This error gets undetected in many system as they disable replicated ID checking for performance, but it's still a problem in some.


Information Download

Information Uploader

Information License

All versions of this File are licensed under:

Information Credits (1)

(People/Groups)

Information Attributions (0)

(Workflows/Files)

None

Information Tags (1)

Log in to add Tags

Information Shared with Groups (1)

Information Featured In Packs (0)

None

Log in to add to one of your Packs

Information Attributed By (0)

(Workflows/Files)

None

Information Favourited By (0)

No one

Information Statistics

596 viewings

348 downloads

[ see breakdown ]

 

Version History

In chronological order:



Comments Comments (0)

No comments yet

Log in to make a comment


What is this?

Linked Data

Non-Information Resource URI: http://www.myexperiment.org/files/308


Alternative Formats

HTML
RDF
XML