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Type: Trident (Package)
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Blob EPR-Solver

Created: 2009-06-05 16:46:06 | Last updated: 2009-06-05 18:10:35

Credits: User booiiing

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This little perl-script automatically probes all assignments (g1, g2, g3) to (gx, gy, gz) (including negated values) in EPR/ESR (electron paramagnetic resonance / electron spin resonance) and tests them for several conditions. In the end, it gives you the assignements, as well as Eg, E1, E2, V/Delta and a, b, c. It is published under the terms of the GNU General Public Licence. Thus uploading is allowed for everyone to make it easier to contribute.

File type: Trident (Package)

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Blob raven.properties file

Created: 2009-05-28 10:28:47

Credits: User Gerard Schaafsma

License: Creative Commons Attribution-Share Alike 3.0 Unported License

For those having problems starting Taverna 1, please try this. Put this file in de conf directory inside the taverna directory (where the runme.bat is), and restart Taverna.

File type: Trident (Package)

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Blob New run.sh for Taverna 2 (in case of problems with n...

Created: 2009-05-28 09:25:03

Credits: User Marco Roos

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This may help solve problems with T2 snapshot.

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Blob Superlight synthetic cannabinoids.

Created: 2017-02-20 18:34:05

Credits: User Yaroslav Zaitsev

License: No license

Superlight sinthetic cannabinoids, design of cannabinoid terpenes nature. 

File type: Trident (Package)

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Blob ISA-TAB-Nano templates in vivo (MOD-ENP-TOX)

Created: 2016-02-26 13:34:38

Credits: User Hanne Vriens

License: Creative Commons Attribution-Share Alike 3.0 Unported License

The files hosted here are Excel-based templates for the creation of ISA-TAB-Nano datasets which were developed within the context of the MOD-ENP-TOX project [http://fys.kuleuven.be/apps/modenptox/project_objectives.php]. The files are specifically designed to store in vivo toxicity data of nanomaterials.

File type: Trident (Package)

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Blob ISA-TAB-Nano templates in vitro (MOD-ENP-TOX)

Created: 2016-02-26 13:32:14

Credits: User Hanne Vriens

License: Creative Commons Attribution-Share Alike 3.0 Unported License

The files hosted here are Excel-based templates for the creation of ISA-TAB-Nano datasets which were developed within the context of the MOD-ENP-TOX project [http://fys.kuleuven.be/apps/modenptox/project_objectives.php]. The files are specifically designed to store in vitro toxicity data of nanomaterials.

File type: Trident (Package)

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Blob Miniworld model in Systo JSON format

Created: 2015-05-22 15:32:23

Credits: User Robert Muetzelfeldt

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Miniworld model in Systo JSON format 

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Blob forester_1037.jar

Created: 2014-10-03 11:27:41 | Last updated: 2014-10-03 12:33:14

License: GNU Lesser General Public License (LGPL) 2.1

forester is a collection of open source libraries of Java software for phylogenomics and evolutionary biology research. For example, the tree viewer Archaeopteryx is based on forester. The forester website is at https://sites.google.com/site/cmzmasek/home/software/foresterThe current developer version is available through Google code at: http://code.google.com/p/forester/Author: Christian Zmasek, Sanford-Burnham Medical Research Instituteforester is Cop...

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Blob example output of the concept profile generation pip...

Created: 2014-06-26 14:52:48

Credits: User Amrish Mahes

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This is an example output the workflow "Concept Profile Generation Pipeline" produces when the input for the thesaurus is the thesaurus example in the workflow itself and the abstract input is from the SQL file named "example standard input for Concept Profile Generation Pipeline". This SQL file needs to be run in a SQL program with a pre-created database/schema called mydb. It produces 5 tables. These consists out of the co-occurrence, occurrence, unce...

File type: Trident (Package)

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Blob example standard input for Concept Profile Generatio...

Created: 2014-06-26 14:36:00

Credits: User Amrish Mahes

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This is a SQL file containing example standard input values for testing the concept profile generation pipeline. Run this SQL file in your SQL program with a pre-created database/schema named mydb. It will insert 1 table called abstracts with 10 abstracts and their pubmed id. The workflow will use this table as input for finding concept occurrences. 

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