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InviteGroup: VL-e
Group of researchers of the Virtual Laboratory e-Science (VL-e) project in the Netherlands. This is a large nation wide e-science research project funded by BSIK grants from the Dutch ministry of Economic Affairs. Its activities range from Grid infrastructure, to middleware, to (six) applications. The projects BioRange and BioAssist (also groups here) are tightly associated with VL-e.
Created at: Wednesday 23 January 2008 @ 15:17:17 (GMT)
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Created: 01/08/08 @ 10:52:42 | Last updated: 01/08/08 @ 12:06:07
Pack of tools and software components that can be used to enhance your research.
'e-science' characteristics:
interoperabie with other tools
free to use by academics
components can be shared and reused, potentially for other means
stimulating sharing and reusing components
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Created: 15/05/09 @ 15:45:32 | Last updated: 11/08/11 @ 10:01:23
Supporting material for BMC Bioinformatics, supplement for Semantic Web Applications and Tools for Life Science (2009)
Structuring and extracting knowledge for the support of hypothesis generation in molecular biology
Marco Roos, M. Scott Marshall, Andrew P. Gibson, Martijn Schuemie, Edgar Meij, Sophia Katrenko, Willem Robert van Hage, Konstantinos Krommydas, Pieter W. Adriaans
Acknowledgements
We thank the myGrid team and OMII-UK for their support in applying their e-Science tools, and M...
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Created: 26/05/09 @ 18:16:31 | Last updated: 27/05/09 @ 07:09:58
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow uses AIDA components to index all of the workflows on MyExperiment. First, it lists and downloads each workflow's xml file. Then, the titles and descriptions are parsed and submitted to an Indexer webservice. After it's finished, your index will be searchable by visiting http://aida.science.uva.nl:9999/search.
Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 78 times | Downloaded: 35 times Tags (4): |
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Created: 16/05/09 @ 01:06:26 | Last updated: 16/05/09 @ 01:13:18
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License: Creative Commons Attribution-No Derivative Works 3.0 Unported License
This workflow is for demonstration purposes only. Please contact the authors if you wish to try it. We will gladly collaborate with you.
Summary
This workflow extracts proteins and protein relations from Medline. Extracted protein names (symbols of at least 3 characters) are validated against mouse, rat, and human UniProt symbols, so the results are limited to these species. This workflow follows the following basic steps:
it retrieves documents relevant for the query string
i...
Rating: 0.0 / 5 (0 ratings) | Versions: 7 | Reviews: 0 | Comments: 1 | Citations: 0 Viewed: 149 times | Downloaded: 31 times Tags (10): |
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Copyright © 2007 - 2011 The University of Manchester and University of Southampton
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