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InviteGroup: IST 600
Group for students in IST 600, "Workflows: eScience & eResearch" to share workflows.
Created at: Wednesday 17 August 2011 @ 03:12:37 (GMT)
Unique name: IST600
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Created: 12/09/11 @ 18:17:05 | Last updated: 12/09/11 @ 18:22:14
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Use the local java plugins and some filtering operations to fetch the comic strip image from http://www.johnnywander.com/ Based on the FetchDailyDilbert workflow & Fetch today's XKDC comic
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Created: 13/09/11 @ 05:29:07 | Last updated: 13/09/11 @ 05:30:48
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow allows for the input of a list of zipcodes and outputs the weather for the zip codes.
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Created: 14/09/11 @ 01:35:28 | Last updated: 14/09/11 @ 01:35:29
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Data input file for problem 3 in Problem Set 3 for IST 600 at Syracuse University in Fall 2011.
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Created: 14/09/11 @ 02:04:44
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Data input file for Problem 3 on Problem Set 3 for IST 600 at Syracuse University in Fall 2011.
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Created: 14/09/11 @ 02:06:18 | Last updated: 14/09/11 @ 02:08:13
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Data input file for Problem 3 on Problem Set 3 for IST 600 at Syracuse University in Fall 2011.
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Created: 14/09/11 @ 02:37:49 | Last updated: 14/09/11 @ 02:37:50
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Input file for Problem 2, Part 1 in Problem Set 3 for IST 600 at Syracuse University in Fall 2011.
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Created: 14/09/11 @ 02:39:04 | Last updated: 14/09/11 @ 02:44:58
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Input file for Problem 2, Part 2 in Problem Set 3 for IST 600 at Syracuse University in Fall 2011.
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Created: 14/09/11 @ 02:40:17 | Last updated: 14/09/11 @ 02:40:59
A pack of the inputs for PS3 in IST 600 at Syracuse University in Fall 2011.
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Created: 14/09/11 @ 04:32:48 | Last updated: 14/09/11 @ 05:01:30
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Use the local java plugins and some filtering operations to fetch the comic strip image from http://xkcd.com/ Based on the FetchDailyDilbert workflow.
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Created: 14/09/11 @ 05:17:49 | Last updated: 14/09/11 @ 05:22:52
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow uses local java plugins and filtering operations to fetch today's comic strip image from http://www.girlswithslingshots.com/. Girls with Slingshots focuses on the lives of a group of women in their twenties. It is one of the few major webcomics to pass the Bechdel test. Based on the workflow "Fetch today's xkcd comic" by Tom Oinn and Stian Soiland-Reyes.
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Created: 14/09/11 @ 05:23:48
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow takes a list of zipcodes and generates their seven-day weather reports using the USA Weather Forecast from http://www.webservicex.net/WS/WSDetails.aspx?WSID=68&CATID=12
The output includes maximum and minimum temperatures in both Fahrenheit and Celsius.
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Created: 14/09/11 @ 05:46:28 | Last updated: 14/09/11 @ 05:46:25
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Get the weather forcast of the day for you city.
Info display: wind, visibility, temperature, sky conditions and pressure.
The default value is my home town.
To find out any supported city run the 'Get cities by country name' workflow
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Created: 14/09/11 @ 16:17:15 | Last updated: 14/09/11 @ 16:17:16
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow uses an input port to take a list of zipcodes as input. Using the "GetWeatherByZipcode" service ('USA Weather Forecast' web services from WebserviceX.net), the weather forecast is retrieved for each of the zipcodes from the input. These forecasts are output as XML trees.
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Created: 13/09/11 @ 23:05:00 | Last updated: 14/09/11 @ 15:58:54
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow retrieves the newest comic from http://qwantz.com. Using a string constant to input the URL, the workflow then copies the HTML code from the location indicated by the URL. A list of links to images is then taken from the HTML code. Using a regluar expression supplied by another string constant, this list is then search for the URL specificallyt for the comic. The image file for the comic is then retrieved and the comic is displayed as the workflow output.img, #cubbies-overlay{ -...
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Created: 21/09/11 @ 02:52:40 | Last updated: 21/09/11 @ 03:23:11
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow fetches the details of the countries in the world and then uses R to produce a histogram of the log of their population. Prompts the user to enter a title for the histogram.
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Created: 21/09/11 @ 03:11:29 | Last updated: 21/09/11 @ 03:11:26
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow fetches the details of the countries in the world and then uses R to produce a histogram of the log of their population
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Created: 21/09/11 @ 03:30:27 | Last updated: 21/09/11 @ 03:31:32
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow allows one to find the average and standard deviation of a set of values.
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Created: 21/09/11 @ 04:31:29 | Last updated: 21/09/11 @ 19:24:00
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow allows one to produce a single list of statistical output with the list name, average, and standard deviation of the values. This workflow only produces the average and standard deviation from the input values
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Created: 21/09/11 @ 05:38:20 | Last updated: 21/09/11 @ 05:41:25
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Example using the SpreadsheetImport service to import data from an Excel spreadsheet. The workflow imports the file spreadsheet file FertilizerUse.xlsx and generates a graph from the date. The source data is from http://www.myexperiment.
org/files/568/download/FertilizerUse.xls and ERS, TVA (Tennessee Valley Authority), AAPFCO (Association of American Plant Food Control Officials), TFI (The Fertilizer Institute).
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Created: 21/09/11 @ 07:14:29 | Last updated: 21/09/11 @ 07:41:48
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This incredibly awkward script has another embedded script associated with it. It essentially smashes the output from the other workflows together using a Beanshell script.
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Created: 21/09/11 @ 07:16:28 | Last updated: 21/09/11 @ 07:16:25
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow takes an input file of a list of numbers and runs it through a simple Python script to produce the standard deviation and average.
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Created: 21/09/11 @ 07:25:25 | Last updated: 21/09/11 @ 07:48:54
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow uses a Python script to take a provided filename (or list of filenames) containing numbers (one per line) and return the standard deviation and average (or mean).
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Created: 21/09/11 @ 07:09:43 | Last updated: 21/09/11 @ 07:09:41
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Imports data from NY and NJ to compare broccoli harvest vs. planting rates across the two states. The workflow is currently set to evaluate data from 1960 to 1965.
Source: Compiled by ERS from data of USDA, National Agricultural Statistics Service, Vegetables Final Estimates.
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Created: 21/09/11 @ 07:09:00 | Last updated: 21/09/11 @ 07:08:58
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow takes data from the ERS, TVA (Tennessee Valley Authority), AAPFCO (Association of American Plant Food Control Officials), and the TFI (The Fertilizer Institute) and represents them in a bar chart.
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Created: 21/09/11 @ 08:39:27 | Last updated: 21/09/11 @ 08:41:26
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Uses the SpreadsheetImport service to import data from an Excel spreadsheet. The workflow imports two files and generates a single graph comparing the information from the two spreadsheets.
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Created: 21/09/11 @ 18:10:49 | Last updated: 21/09/11 @ 18:10:53
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License: Creative Commons Attribution 3.0 Unported License
This workflow fetches the details of the countries in the world and then uses R to produce a histogram of the log of their population
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Created: 21/09/11 @ 18:09:09 | Last updated: 21/09/11 @ 18:09:06
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Based on Spreadsheet Import Example by David WithersSusan
Example using the SpreadsheetImport service to import data from an Excel spreadsheet.
The workflow imports the file spreadsheet file WaterUse.xlsx and generates a graph from the date.
The source data is from http://data.gov.uk/
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Created: 21/09/11 @ 18:22:17 | Last updated: 21/09/11 @ 18:32:23
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License: Creative Commons Attribution 3.0 Unported License
Example using the SpreadsheetImport service to import data from an Excel spreadsheet. The workflow imports the file spreadsheet FertilizerUse.xls and generates a graph from the date. The spreadsheet is available at http://www.myexperiment.
org/files/568/download/FertilizerUse.xlsimg, #cubbies-overlay{ -moz-transition-property: margin, box-shadow, z-index; -moz-transition-duration: 0.1s; -webkit-transition-property: margin, box-shadow, z-index; -webkit-transition-duration: 0.1s; }
.cubbies-s...
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Created: 21/09/11 @ 18:13:12 | Last updated: 21/09/11 @ 18:13:09
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Tried to show 2 charts simulatneously.
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Created: 21/09/11 @ 18:05:32 | Last updated: 21/09/11 @ 18:05:29
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Used the Rshell to find the MEAN and standard deviation of a list of values.
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Created: 21/09/11 @ 18:02:12 | Last updated: 21/09/11 @ 18:02:09
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow fetches the details of the countries in the world and then uses R to produce a histogram of the log of their population
Based on Population histogram in R by
Alan R Williams
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Created: 21/09/11 @ 18:35:26 | Last updated: 21/09/11 @ 18:48:09
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License: Creative Commons Attribution 3.0 Unported License
Example using two instances of the SpreadsheetImport service to import data from Excel spreadsheets. The workflow imports these file spreadsheets f and generates a graph comparing the data.img, #cubbies-overlay{ -moz-transition-property: margin, box-shadow, z-index; -moz-transition-duration: 0.1s; -webkit-transition-property: margin, box-shadow, z-index; -webkit-transition-duration: 0.1s; }
.cubbies-selected{ z-index: 9999; box-shadow: 3px 3px 8px -1px blue !important; cursor: pointer ...
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Created: 21/09/11 @ 18:50:23 | Last updated: 21/09/11 @ 19:28:04
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License: Creative Commons Attribution 3.0 Unported License
This workflow is a simple example of how to input a list of numeric values and perform some ultra-basic calculations using Rserve. The output is two separate numbers, the mean and standard deviation of the list of input values.
img, #cubbies-overlay{ -moz-transition-property: margin, box-shadow, z-index; -moz-transition-duration: 0.1s; -webkit-transition-property: margin, box-shadow, z-index; -webkit-transition-duration: 0.1s; }
.cubbies-selected{ z-index: 9999; box-shadow: 3px 3px 8px -1px...
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Created: 21/09/11 @ 21:50:15 | Last updated: 21/09/11 @ 21:50:16
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License: Creative Commons Attribution 3.0 Unported License
This is an ultra basic Kepler workflow that prints a few strings. Need to know how to print string constants? Look here.
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Created: 22/09/11 @ 01:55:04 | Last updated: 22/09/11 @ 02:07:03
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
A workflow that concatenates a series of sentences into a single string. Sample data is from hipsteripsum.me.
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Created: 22/09/11 @ 02:02:49 | Last updated: 22/09/11 @ 02:05:06
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow solves for the problem x = 3 : |(x+5)/(x-5)|.
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Created: 22/09/11 @ 02:11:23 | Last updated: 22/09/11 @ 02:18:54
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow in Kepler fetches an Image from a URL, and displays the image in a new window.
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Created: 27/09/11 @ 17:01:18 | Last updated: 27/09/11 @ 17:03:52
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This Kepler workflow allows one to display multiple strings together with the use of a display actor with its input multiport. The result is each string output on a line, but all together.
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Created: 27/09/11 @ 17:12:33 | Last updated: 27/09/11 @ 17:12:34
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This Kepler allows one to perform mathematical equations, including addition, subtraction, muliplication, and division.
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Created: 27/09/11 @ 17:35:10 | Last updated: 27/09/11 @ 17:35:11
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This Kepler allows one to fetch a Buni comic from the image URL.
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Created: 27/09/11 @ 18:04:46 | Last updated: 27/09/11 @ 18:04:48
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This script is based on the classic "Hello World" in Kepler created by Matt Jones (May 2006) at NCEAS.
It takes a string of phrases from the generator at http://hipsteripsum.me/ and consolidates the strings into one long paragraph.
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Created: 27/09/11 @ 18:13:22 | Last updated: 27/09/11 @ 18:13:25
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow provides a way to do more complex addition/subtraction (and mutliplication/division) operations in Kepler. All of the input values are completely customizable.
Based on the workflow 01-SimpleAddition.kar by Matt Jones (NCEAS) in May 2006. The workflow is packaged with Kepler.
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Created: 27/09/11 @ 18:18:01 | Last updated: 27/09/11 @ 18:18:03
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow grabs the Silly Vamp comic strip. It is inspired by the Taverna workflow to get the latest XKCD comic.
The comic date can be customized. Please right-click on "IMAGE NAME" and change the value
to the specific date you want. The date format is
YYMMDD
For example, June 26, 2011 would be:
110626
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Created: 27/09/11 @ 18:23:38 | Last updated: 27/09/11 @ 18:23:40
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow provides a way to do more complex addition/subtraction (and mutliplication/division) operations in Kepler. All of the input values are completely customizable. This is the second of two workflows (the extra credit).
Based on the workflow 01-SimpleAddition.kar by Matt Jones (NCEAS) in May 2006. The workflow is packaged with Kepler.
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Created: 28/09/11 @ 04:16:05 | Last updated: 28/09/11 @ 04:16:07
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This Kepler workflow does this basic calculation:
3 + 5 */ 3 + - 5 then take the absolute value of the whole mess
Based on BasicAddition by Matt Jones
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Created: 28/09/11 @ 04:18:06 | Last updated: 28/09/11 @ 04:18:08
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This Kepler workflow displays an image when a URL is supplied.
Based on DisplayImage by Matt Jones
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Created: 28/09/11 @ 06:54:14 | Last updated: 28/09/11 @ 06:54:11
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
A kepler workflow that concatenates 5 strings of random Hipster Geek from http://hipsteripsum.me/ into a word-wrapped paragraph.
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Created: 28/09/11 @ 07:00:03 | Last updated: 28/09/11 @ 07:00:00
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
A kepler workflow to solve the following problem:
If x=3, solve for x: |(x+5)/(x-5)|
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Created: 21/09/11 @ 15:23:11 | Last updated: 21/09/11 @ 15:23:08
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Example using the SpreadsheetImport service to import data from an Excel spreadsheet.
The workflow imports the file spreadsheet file FertilzerUse.xlsx and generates a graph from the date.
The source data is from http://www.myexperiment.org/files/568/download/FertilizerUse.xls. Based on the water use workflow by David Withers
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Created: 21/09/11 @ 08:52:43 | Last updated: 21/09/11 @ 08:52:41
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Example using the SpreadsheetImport service to import data from an Excel spreadsheet.
The workflow imports the file spreadsheet file FertilzerUse.xlsx and generates a graph from the date.
The source data is from http://www.myexperiment.org/files/568/download/FertilizerUse.xls. Based on the water use workflow by David Withers
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Created: 21/09/11 @ 07:51:07 | Last updated: 21/09/11 @ 07:51:04
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
A workflow to calculate and name the average and standard deviation of a list of numbers. Changes made to the original workflow are: an inout and output, a concatenation to list the average and standard deviation outputs, a string constant to name the list, and a concatenation to string the name znd the calculations.
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Created: 21/09/11 @ 05:51:09 | Last updated: 21/09/11 @ 05:51:06
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow fetches the details of the countries in the world and then uses R to produce a histogram of the log of their population. Based on "Population Histogram in R" by Alan R Williams
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Created: 28/09/11 @ 07:16:30 | Last updated: 28/09/11 @ 07:16:33
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
A work flow that answers the following equation:
If x=3, solve for x: |(x-5)/(x+5)| + |(x+5)/(x-5)|
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Created: 28/09/11 @ 07:26:22 | Last updated: 28/09/11 @ 07:26:26
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow converts the Lackadaisy Cats comic to an image in Kepler.
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Created: 28/09/11 @ 14:50:25
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License: Creative Commons Attribution 3.0 Unported License
This workflow takes 5 constants and outputs five lines of text. In this example, the constant boxes are filled with meaningless text copied and pasted from http://hipsteripsum.me.
This workflow is a modification to the "04-HelloWorld.xml" example file that comes with Kepler.
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Created: 28/09/11 @ 15:01:20
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License: Creative Commons Attribution 3.0 Unported License
This workflow is an example of how Kepler can be used to perform a simple mathematics operation.
This example is based on Kepler example file "01-SimpleAddition.xml".
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Created: 28/09/11 @ 15:39:57 | Last updated: 28/09/11 @ 15:39:59
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License: Creative Commons Attribution 3.0 Unported License
This workflow fetches a comic from http://qwantz.com
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Created: 05/10/11 @ 04:58:33 | Last updated: 05/10/11 @ 06:11:56
This workflow and pack were designed for a class project. The Kepler based workflow allows one to extract specific information from a gene sequence by using the accession ID as input. By using two web services created for the DNA Data Bank of Japan (DDBJ, http://www.xml.nig.ac.jp/wabi/Method?serviceName=DDBJ&mode=methodList&lang=en), one can extract the sequence header information as an output file, as well as retrieve the sequence, base pair count, and base pair ratios in...
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Created: 05/10/11 @ 05:04:40 | Last updated: 05/10/11 @ 05:04:42
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This is a workflow which allows one to extract gene sequence information using the accession number as the input. Multiple outputs include a file output of sequence header information, as well as one output window of base pair count, ratios and gene sequence.
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Created: 05/10/11 @ 05:59:24 | Last updated: 05/10/11 @ 06:05:50
This pack contains the Excel file for What's the Season?, the workflow itself, and the inputs/outputs used for testing. The inputs/outputs are included in a .zip file.
What's the Season? will take a list of astronomical objects and check them against an Excel file. The Excel file currently contains Messier objects with magnitudes less than 6.0 (common names unless the common name is ambiguous or nonexistent, and then it goes by Messier number). It also contains really bright stars. If none o...
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Created: 05/10/11 @ 15:28:19 | Last updated: 05/10/11 @ 16:02:12
This pack includes a worflow and its results. The workflow extracts data from the Times Series Data Library and graphs it using Google charts. The workflow also produces a citation for the date the data was accessed.
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Created: 05/10/11 @ 15:37:43 | Last updated: 05/10/11 @ 15:37:40
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow uses time series data from Rob Hyndman's Time Series Data Library (TSDL) and graphs it with Google charts. It also provides the citation information with the current date. The outputs are a Google Chart and the corresponding citation information.
The inputs are URL strings for two datasets provided by Rob Hyndman under the subject of Ecology. These datasets include the annual number of lynx pelts and the annual unit price of lynx pelts during the year range 1857 -1911.
This...
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Created: 05/10/11 @ 15:32:38 | Last updated: 05/10/11 @ 15:59:37
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This is an image of the results from the Time Series Data Library Graph and Citation workflow. This is the Google charts image within Taverna.
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Created: 05/10/11 @ 15:41:16 | Last updated: 05/10/11 @ 16:00:18
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This is an image of the citation result produced from the Time Series Data Library Graph and Citation workflow.
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Created: 06/10/11 @ 01:00:20 | Last updated: 06/10/11 @ 01:01:19
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Population numbers of White Ash, Beech and Hemlock in Onondaga County, NY fromm 2002 to 2008.
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Created: 06/10/11 @ 01:13:43 | Last updated: 06/10/11 @ 01:15:03
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow graphs the numbers of White Ash, Beech and Hemlock in Onondaga, NY from 2002 to 2008.
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Created: 06/10/11 @ 01:21:43 | Last updated: 06/10/11 @ 01:23:08
This is the workflow, and the basic CSV that it pulls from that plots the populations of White Ash, Beech, and Hemlock in Onondaga County, NY from 2002 to 2008.
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Created: 06/10/11 @ 01:23:35
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
File used for testing my workflow.
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Created: 06/10/11 @ 03:06:32 | Last updated: 06/10/11 @ 04:15:33
This pack contains the workflows and supplemental files that I created for a project in IST600 - eScience and eResearch Workflows.
This workflow accepts city and country names as user-supplied input. These value are supplied to the GetWeather webservice (http://www.webservicex.net/globalweather.asmx?WSDL), which returns an XML record of location and weather info for each recognized city. (See the uploaded photo "weather example")
The XML returned from GetWeather is then searched u...
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Created: 06/10/11 @ 03:21:19 | Last updated: 06/10/11 @ 03:22:29
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License: Creative Commons Attribution 3.0 Unported License
This workflow ...tbc
img, #cubbies-overlay{ -moz-transition-property: margin, box-shadow, z-index; -moz-transition-duration: 0.1s; -webkit-transition-property: margin, box-shadow, z-index; -webkit-transition-duration: 0.1s; }
.cubbies-selected{ z-index: 9999; box-shadow: 3px 3px 8px -1px blue !important; cursor: pointer !important; margin: -3px 3px 3px -3px; }
.cubbies-selected:active{ box-shadow: 2px 2px 5px -1px darkblue !important; margin: -1px 1px 1px -1px; }
#cubbies-overlay{ positio...
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Created: 06/10/11 @ 03:24:49 | Last updated: 06/10/11 @ 03:24:50
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License: Creative Commons Attribution 3.0 Unported License
This screenshot shows the format of the weather and location XML output by the GetWeather service.
img, #cubbies-overlay{ -moz-transition-property: margin, box-shadow, z-index; -moz-transition-duration: 0.1s; -webkit-transition-property: margin, box-shadow, z-index; -webkit-transition-duration: 0.1s; }
.cubbies-selected{ z-index: 9999; box-shadow: 3px 3px 8px -1px blue !important; cursor: pointer !important; margin: -3px 3px 3px -3px; }
.cubbies-selected:active{ box-shadow: 2px 2px 5px -1p...
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Created: 06/10/11 @ 03:27:24 | Last updated: 06/10/11 @ 03:27:29
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License: Creative Commons Attribution 3.0 Unported License
This screenshot shows the "Elevation plot..." workflow with the nested workflows compact.
img, #cubbies-overlay{ -moz-transition-property: margin, box-shadow, z-index; -moz-transition-duration: 0.1s; -webkit-transition-property: margin, box-shadow, z-index; -webkit-transition-duration: 0.1s; }
.cubbies-selected{ z-index: 9999; box-shadow: 3px 3px 8px -1px blue !important; cursor: pointer !important; margin: -3px 3px 3px -3px; }
.cubbies-selected:active{ box-shadow: 2px 2px 5px -1...
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Created: 06/10/11 @ 03:29:43 | Last updated: 06/10/11 @ 03:29:52
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License: Creative Commons Attribution 3.0 Unported License
this screenshot shows the entire workflow, with nested workflows expanded
img, #cubbies-overlay{ -moz-transition-property: margin, box-shadow, z-index; -moz-transition-duration: 0.1s; -webkit-transition-property: margin, box-shadow, z-index; -webkit-transition-duration: 0.1s; }
.cubbies-selected{ z-index: 9999; box-shadow: 3px 3px 8px -1px blue !important; cursor: pointer !important; margin: -3px 3px 3px -3px; }
.cubbies-selected:active{ box-shadow: 2px 2px 5px -1px darkblue !important; ma...
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Created: 06/10/11 @ 03:32:17 | Last updated: 06/10/11 @ 03:32:19
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License: Creative Commons Attribution 3.0 Unported License
This screenshot shows what output of the "Elevation plot..." workflow looks like.
img, #cubbies-overlay{ -moz-transition-property: margin, box-shadow, z-index; -moz-transition-duration: 0.1s; -webkit-transition-property: margin, box-shadow, z-index; -webkit-transition-duration: 0.1s; }
.cubbies-selected{ z-index: 9999; box-shadow: 3px 3px 8px -1px blue !important; cursor: pointer !important; margin: -3px 3px 3px -3px; }
.cubbies-selected:active{ box-shadow: 2px 2px 5px -1px darkb...
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Created: 06/10/11 @ 03:53:12 | Last updated: 06/10/11 @ 04:12:18
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow gunzips a *.gbk.gz file, converts it to XML (via agavewriter) and finds the Element ID.
Does not work on *.gz files larger than 10MB.
I upped the JVM settings on Taverna to:
<key>VMOptions</key>
<string>-Xmx4096m -XX:MaxPermSize=1024m</string>
Created my own agave.dtd to get the XPath service to work the XML file generated from the Read_GenBank_File service. You will need to ...
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Created: 06/10/11 @ 03:54:30 | Last updated: 06/10/11 @ 16:32:18
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Functionally identical to the original. I tried to upload a version with annotation, but somehow the notes didn't make it to myExperiment.
From the prior verion:
This workflow accepts city and country names as user-supplied input. These value are supplied to the GetWeather webservice (http://www.webservicex.net/globalweather.asmx?WSDL), which returns an XML record of location and weather info for each recognized city. (See the uploaded photo "weather example")
The XML returned fr...
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Created: 06/10/11 @ 03:58:11 | Last updated: 06/10/11 @ 04:32:39
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License: Creative Commons Attribution 3.0 Unported License
This workflow takes in a string value or list of values and pulls out latitude coordinates formatted as ##-##(N or S) using the following regular expression: \d\d-\d\d(N|S). The coordinates are processed and formatted to be in the form required by the web service used in my "Elevation plot" workflow.
This workflow contains primarily string manipulation. For many of the text and list services used, the beanshell script needed to be modified in order to produce the formatting I requi...
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Created: 06/10/11 @ 03:19:41 | Last updated: 06/10/11 @ 04:15:32
No description
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Created: 06/10/11 @ 04:06:57 | Last updated: 06/10/11 @ 04:29:35
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License: Creative Commons Attribution 3.0 Unported License
This workflow takes in a string value or list of values and pulls out longitude coordinates formatted as ###-##(N or S) using the following regular expression: \d\d\d-\d\d(E|W). The coordinates are processed and formatted to be in the form required by the web service used in my "Elevation plot" workflow.
This workflow primarily contains string manipulation. For many of the text and list services used, the beanshell script needed to be modified in order to produce the formatti...
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Created: 06/10/11 @ 04:34:31 | Last updated: 06/10/11 @ 04:55:05
This pack includes the Mapping Service Workflow and a spreadsheet with supporting data.
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Created: 06/10/11 @ 04:36:47 | Last updated: 06/10/11 @ 04:36:49
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Spreadsheet to use in support of the Mapping Service workflow.
Includes both coordinates and place names.
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Created: 06/10/11 @ 04:44:03 | Last updated: 06/10/11 @ 05:01:20
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This service generates a google map of a group of place names and coordinates. The workflow will accept both coordinates and place names.
This workflow takes place names/coordinates from both a spreadsheet, as well as on-the-fly input of a list of coordinates or place names (please note, if no supplemental data is desired, an empty link will allow the workflow to function).
The Mapping Service workflow was created to assist in generating a map of where a series of interviews took p...
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Created: 28/11/11 @ 16:51:34 | Last updated: 28/11/11 @ 17:12:37
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow is a comparison of China's population with the United States. It also compared the population of males and females from ages 0 - 4 to illustrate any gender gaps that may be occurring in the birth rates. The graphs are produced through the google chart API service. The data is from world population spreadsheets obtained from Gapminder.org.
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Non-Information Resource URI: http://www.myexperiment.org/groups/660
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