Pack: Extract Gene Sequence Information with Kepler

Created: 2011-10-05 04:58:33      Last updated: 2011-10-05 06:11:56
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Title: Extract Gene Sequence Information with Kepler


Information Description

This workflow and pack were designed for a class project.  The Kepler based workflow allows one to extract specific information from a gene sequence by using the accession ID as input.  By using two web services created for the DNA Data Bank of Japan (DDBJ, http://www.xml.nig.ac.jp/wabi/Method?serviceName=DDBJ&mode=methodList&lang=en), one can extract the sequence header information as an output file, as well as retrieve the sequence, base pair count, and base pair ratios in one output window within Kepler.  DDBJ contains the same sequence information as GenBank, therefore the accession ID input works for each web service.

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Information Relationships (2)

  1. Header Information File Writer Output is an output from Extract Gene Sequence with Kepler.
  2. Multiple Tab Output is an output from Extract Gene Sequence with Kepler.


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All versions of this Pack are not licensed.

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218 viewings

47 downloads

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