Search results for "openms"

get_available_algorithms (3)

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Retrieves all available algorithms from the openModeller web service, returning an XML.

Created: 2013-12-06 | Last updated: 2014-11-04

parse_csv_points (4)

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Parses csv content with species occurrence points in the DarwinCore archive format, determining column indexes and returning the records as a list of points in openModeller format (XML). No distinction is made between presences or absences.

Created: 2013-12-24 | Last updated: 2014-11-18

select_layers (4)

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Displays an interface to select one or more environmental layers. Returns a list of labels and a list of ids for the selected layers, both lists separated by line feed.

Created: 2013-12-06 | Last updated: 2015-05-11

show_test_results (4)

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Displays test results (ROC curve and confusion matrix) on an interface, allowing users to decide to continue the workflow or not.

Created: 2013-12-24 | Last updated: 2015-05-11

select_algorithm_and_set_parameters (2)

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Displays an interface to select one of the algorithms and then another interface to set algorithm parameter values. Returns selected algorithm and parameter values as XML.

Created: 2013-12-06 | Last updated: 2015-04-04

select_or_create_mask (7)

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Displays an interface so that users can select or create a mask.

Created: 2013-12-10 | Last updated: 2015-04-04

Bioclim workflow (6)

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This workflow takes as input a file containing species occurrence points to create a model with the openModeller Web Service using the Bioclim algorithm. Environmental layers and mask are selected during the workflow. Points are filtered so that only environmentally unique points are used to create the model. You can use this workflow to either filter a set of species occurrence points excluding redundant points with the same environmental conditions (you can get the result in the output "se...

Created: 2013-09-02 | Last updated: 2015-04-04

Credits: Renato De Giovanni BioVeL

test_model (11)

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Tests a model based on the specified parameters (confusion matrix and/or ROC curve).

Created: 2013-12-10 | Last updated: 2014-12-04