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lymphoma workflow

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Items tagged with "lymphoma workflow" (4)

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Files (3)

Uploader:

Wei Tan

Input CQL of the lymphoma prediction workflow

Created: 23/04/09 @ 17:25:04 | Last updated: 23/04/09 @ 17:28:24

Credits: Wei Tan

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Input CQL of the lymphoma prediction workflow at http://www.myexperiment.org/workflows/746?version=1. It is only for the purpose of illustration and NOT needed to run the workflow since the input has already been embedded.

File type: XML

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Uploader:

Wei Tan

Output of the lymphoma prediction workflow

Created: 23/04/09 @ 17:37:16

Credits: Wei Tan

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Output of the lymphoma prediction workflow at http://www.myexperiment.org/workflows/746?version=1. It shows the lymphoma type prediction results. It contains lymphoma type predictions for 38 samples and there is only one error (on testSample_4).

File type: XML

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Wei Tan

Output of the lymphoma prediction workflow (on Ubuntu Linux)

Created: 23/04/09 @ 20:06:51

Credits: Wei Tan

License: Creative Commons Attribution-Share Alike 3.0 Unported License

testing on Ubuntu Linux 8.0.4 + Java 1.5_16

File type: XML

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Workflows (1)

Taverna 2

Original Uploader

Wei Tan

Lymphoma type prediction based on microarray data (v7)

Created: 11/05/10 @ 19:04:30 | Last updated: 11/05/10 @ 19:04:32

Credits: Wei Tan Madduri Stian Soiland-Reyes

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Scientific value Using gene-expression patterns associated with DLBCL and FL to predict the lymphoma type of an unknown sample. Using SVM (Support Vector Machine) to classify data, and predicting the tumor types of unknown examples. Steps Querying training data from experiments stored in caArray. Preprocessing, or normalize the microarray data. Adding training and testing data into SVM service to get classification result.

Rating: 0.0 / 5 (0 ratings) | Versions: 7 | Reviews: 0 | Comments: 0 | Citations: 2

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