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Items tagged with "homology" (3)
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Created: 09/01/08 @ 12:03:03 | Last updated: 09/01/08 @ 12:31:27
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow performs a generic protein sequence analysis. In order to do that a novel protein sequence enters into the software along with a list of known protein identifiers chosen by the biologist to perform a homology search, followed by a multiple sequence alignment and finally a phylogenetic analysis.
Rating: 4.0 / 5 (2 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 1615 times | Downloaded: 430 times Tags (10): |
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Created: 15/09/09 @ 15:05:11
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This is the Taverna 2 version of the Biomart and Emboss Analysis workflow
http://www.myexperiment.org/workflows/158
Using Biomart and EMBOSS soaplab services, This workflow retrieves a number of sequences from 3 species: mouse, human, rat; align them, and returns a plot of the alignment result. Corresponding sequence ids are also returned.
Previous versions of this workflow only returned sequences with an ID mapped to a MIM_morbid_accession. This was primarily to reduce the numbe...
Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 292 times | Downloaded: 85 times Tags (5): |
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Created: 12/05/10 @ 07:31:32 | Last updated: 12/05/10 @ 07:33:11
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
There are many kinds of DNA data derived from many species in DDBJ. It makes possible to carry out the comparative study of genes of multiple species. The workflow provides a list of species and their genes that are similar to a human gene in response to a name of the human gene.
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