Tag Results

Items tagged with "metabolic engineering" (5)

Note: some items may not be visible to you, due to viewing permissions.

Files (1)

Blob Pathway example for Selenzyme

Created: 2017-08-18 08:35:57 | Last updated: 2017-08-23 11:13:20

Credits: User Pablo Carbonell

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Example of an input file containing information about a metabolic pathway to query the KNIME workflow for Selenzyme, an enzyme selection tool for pathway design.The file contains a list of reactions or generic reactions expressed in SMILES or SMARTS (SMIRKS) format. In the example, the list of reactions correspond to the different steps of a biosynthetic pathway.

File type: text/csv

Comments: 0 | Viewed: 12 times | Downloaded: 3 times


Groups (1)

Network-member BioRetroSynth

Unique name: BioRetroSynth
Created: Wednesday 24 May 2017 12:13:13 (UTC)

No description

17 shared items   |   0 announcements


Packs (1)

Pack Selenzyme

Created: 2017-08-18 08:23:47 | Last updated: 2017-08-23 11:12:00

Enzyme selection workflow for pathway design

2 items in this pack

Comments: 0 | Viewed: 16 times | Downloaded: 9 times


Workflows (2)

Workflow RetroPath2.0 - a retrosynthesis workflow w... (5)

The RetroPath2.0 workflow build a reaction network from a set of source compounds to a set of sink compounds.When applied in a retrosynthetic fashion, the source is composed of the target compounds and the sink is composed of the available reactants (for instance in the context of metabolic engineering the sink is the set of native metabolites of a chassis strain). From amongst all the chemical reactions generated using RetroPath2.0 (in the retrosynthetic way), only a subset may effectively l...

Created: 2017-05-24 | Last updated: 2018-02-16

Credits: User Baudoin Delépine Network-member BioRetroSynth

Workflow Workflow for Selenzyme v 1.0 (2)

No description

Created: 2017-08-18 | Last updated: 2017-09-08

Credits: User Pablo Carbonell

What is this?

Linked Data

Non-Information Resource URI: http://www.myexperiment.org/tags/5885

Alternative Formats