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Items tagged with "iteration" (5)

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Workflows (5)

Taverna 1

Original Uploader

Marco Roos

TestIterator (v1)

Created: 28/11/07 @ 15:28:44

Credits: Marco Roos

License: Creative Commons Attribution-Share Alike 3.0 License

Workflow to experiment with list iteration strategies. Look at metadata of nested workflow 'Concatenate' to see the current iteration strategy.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

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Taverna 1

Original Uploader

Marco Roos

TestIteratorStrategy_withNesting (v1)

Created: 29/11/07 @ 15:31:33

Credits: Marco Roos Tomoinn

License: Creative Commons Attribution-Share Alike 3.0 License

Implementation of the iteration workaround by Tom Oin conform the Q&A below. The nested workflow 'NestedProcessor' is called that to conform to Tom's explanation. For an alternative solution using a java beanshell to clone list items see 'TestIteratorStrategy_withCloning. This workflow implements the following Q&A: Marco Roos wrote: > Dear Taverna user, > > Issue 1: Complex iteration > > I would like to perform an iteration including a dot product between > a list and a list of list...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 499 times | Downloaded: 546 times

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Taverna 1

Original Uploader

Marco Roos

TestIteratorStrategy_withCloning (v2)

Created: 29/11/07 @ 15:35:49 | Last updated: 29/11/07 @ 15:40:30

Credits: Marco Roos

License: Creative Commons Attribution-Share Alike 3.0 License

This workflow implements a strategy for this problem: > I would like to perform an iteration including a dot product between > a list and a list of lists; example: > Input: > > [1] (1) > [A,B,C] (2) > [[a,b],[c,d],[e,f]] (3) > > Desired output: > > [1Aa, 1Ab, 1Bc, 1Bd, 1Ce, 1Cf] In this implementation a java beanshell is used to clone the items in list 2 as many times per item as there are items in the sublists of list 3. The iteration strategy...

Rating: 5.0 / 5 (1 rating) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 616 times | Downloaded: 594 times

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Taverna 1

Original Uploader

Alan Williams

Demonstration of configurable iteration (v1)

Created: 05/03/08 @ 14:10:52 | Last updated: 25/03/08 @ 14:40:49

Credits: Tomoinn

License: Creative Commons Attribution 3.0 License

This workflow shows the use of the iteration strategy editor to ensure that only relevant combinations of inputs are used during an implicit iteration.

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Taverna 1

Original Uploader

Stian Soiland-Reyes

Staged iteration strategy (v1)

Created: 07/05/08 @ 12:10:27 | Last updated: 07/05/08 @ 12:32:37

Credits: Stian Soiland-Reyes

License: Creative Commons Attribution-Share Alike 3.0 License

Consider two lists A and B, of equal size 3. A[1] corresponds to B[1], A[2] to B[2], etc, for instance A are image scans from 2007 and B from 2008, and the index indicates the patient number. A = [a0, a1, a2] B = [b0, b1, b2] There's then two lists of possible parameters P and Q, of different lengths, P has 2 and Q has 4 items. P = [p0, p1] Q = [q0, q1, q2, q3] Each of the A items should be processed in ap using each of the P parameters, and each of the B items ...

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