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Items tagged with "protein family" (3)

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Creator:

José Manuel Rodríguez

FunCUT package

Created: 03/10/08 @ 16:47:15

Input example and FunCUT workflow

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Workflows (2)

Taverna 1

Original Uploader

Hamish McWilliam

EBI_InterProScan (v3)

Created: 31/05/08 @ 11:38:58 | Last updated: 26/10/08 @ 20:33:34

Credits: Hamish McWilliam

License: Creative Commons Attribution 3.0 Unported License

Perform an InterProScan analysis of a protein sequence using the EBI’s WSInterProScan service (see http://www.ebi.ac.uk/Tools/webservices/services/interproscan). The input sequence to use and the user e-mail address are inputs, the other parameters for the analysis (see Job_params) are allowed to default. InterProScan searches a protein sequence against the protein family and domain signature databases integrated into InterPro (see http://www.ebi.ac.uk/interpro/). A set of matches to the sig...

Rating: 0.0 / 5 (0 ratings) | Versions: 3 | Reviews: 0 | Comments: 1 | Citations: 0

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Download (v3)

Taverna 1

Original Uploader

José Manuel Rodríguez

runFunCUT (v1)

Created: 03/10/08 @ 10:54:45 | Last updated: 03/10/08 @ 11:49:18

Credits: José Manuel Rodríguez

License: Creative Commons Attribution-Share Alike 3.0 Unported License

MOBY Web Services (synchronous and asynchronous) that describe the FunCUT method. Is recommended use asynchronous MOBY services because the method needs huge range of time. FunCUT Method Short Description: Annotates homologous sequences and includes new features related to the specific identification of protein subfamilies (orthologous groups) FunCUT (Abascal and Valencia, 2003. PROTEINS: Structure, Function, and Genetics 53:683– 692 (2003)) is application based on the study...

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