User: Franck Tanoh

Name: Franck Tanoh

Joined: Wednesday 01 August 2007 @ 15:21:20 (GMT)

Last seen: Thursday 17 March 2011 @ 10:26:23 (GMT)

Email (public): Not specified

Website: Not specified

Location: United Kingdom

26 Friends

2 Groups (admin)

7 Groups (member)

27 Workflows

3 Packs

2 Files

6 Favourites

Franck Tanoh has been credited 35 times

Franck Tanoh has an average rating of:

3.7 / 5

(10 ratings in total)

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Taverna 2 Original Uploader Franck Tanoh	EntrezGeneId_to_GOFunction (v1) Created: 13/05/10 @ 12:07:48 \| Last updated: 13/05/10 @ 12:09:51 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License The workflow takes a list of Entrez gene ids and returns the corresponding GO function definitions. Example value: 1306 486 4712 108 9912 7639 23786 Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 34 times \| Downloaded: 42 times This Workflow has no tags!	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	get_enzymes_by_gene (v1) Created: 08/10/08 @ 16:37:24 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Retrieve all the EC numbers which are assigned to a given gene Input example: eco:b0002 Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 125 times \| Downloaded: 42 times Tags (1): enzyme	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	get_enzymes_by_compound (v1) Created: 08/10/08 @ 16:30:58 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Retrieve all enzymes which have a link to a given compound id Input example: cpd:C00345 Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 26 times \| Downloaded: 12 times Tags (2): compound \| enzyme	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	get_elements_by_pathway (v1) Created: 08/10/08 @ 16:25:59 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Retrieve all objects on specified pathway get_elements_by_pathway Input example: path:bsu00010 Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 46 times \| Downloaded: 24 times Tags (2): elements \| pathway	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	get_element_relations_by_pathway (v1) Created: 08/10/08 @ 16:19:51 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Retrieve all objects and relations on specified pathway Input example: path:bsu00010 Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 40 times \| Downloaded: 24 times Tags (2): elements \| pathway	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	get_drugs_by_pathways (v1) Created: 07/10/08 @ 17:05:11 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Retrieves all drugs on the specified pathway. input example: path:map07025 ; path:eco00020 Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 47 times \| Downloaded: 31 times Tags (2): drug \| pathway	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	get_compounds_by_reaction (v1) Created: 07/10/08 @ 16:58:38 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Retrieve all compounds which have a link to a given reaction_id Example on input: rn:R00100 Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 22 times \| Downloaded: 11 times Tags (2): compound \| reaction	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	get_compounds_by_pathway (v1) Created: 07/10/08 @ 16:49:18 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Retrieves all compounds on the specified pathway Example of input: path:eco00020 Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 32 times \| Downloaded: 21 times Tags (2): compound \| pathway	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	get_best_best_neighbors_by_gene (v1) Created: 02/10/08 @ 13:41:05 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Search the best-best neighbor of a gene in all organisms. Example of input: gene_id: eco:b0002 offset: 1 limit: 10 Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 33 times \| Downloaded: 17 times Tags (1): neighbor-genes	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	color_pathway_by_objects (v1) Created: 01/10/08 @ 17:03:41 \| Last updated: 01/10/08 @ 17:06:10 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Color given objects on a pathway map with specified colors and return the URL of the colored image. In the KEGG pathway maps, a gene or enzyme is represented by a rectangle and a compound is shown as a small circle. Example of input: pathway_id: path:eco00260 object_list: (to add as list) eco:b0514 eco:b2913 fg_color: (to add as list) blue orange bg_color: (to add as list) red orange Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 110 times \| Downloaded: 58 times Tags (3): color \| colour \| pathway	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	color_pathway_by_elements (v2) Created: 30/09/08 @ 18:13:47 \| Last updated: 01/10/08 @ 17:11:38 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Color the objects (rectangles and circles on a pathway map) corresponding to the given 'element_id_list' with the specified colors and return the URL of the colored image. Example of inputs: pathway_id: path:bsu00010 element_list: (to add as list) 78 79 fg_color_list:(to add as list) red blue bg_color_list: (to add as list) green yellow Rating: 0.0 / 5 (0 ratings) \| Versions: 2 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 69 times \| Downloaded: 24 times Tags (1): color pathway	View Download (v2)
Taverna 1 Original Uploader Franck Tanoh	btit (v1) Created: 30/09/08 @ 17:44:11 \| Last updated: 30/09/08 @ 17:46:34 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Retrieve definitions of given database entries available on GenomeNet database. Example of input: hsa:1798 mmu:13478 Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 27 times \| Downloaded: 13 times This Workflow has no tags!	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	binfo (v1) Created: 30/09/08 @ 14:30:08 \| Last updated: 30/09/08 @ 14:31:27 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Show the version information of a specificied database. Example of input: "gb" for Genbank database "sp" for swissprot database "emb" for embl database Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 37 times \| Downloaded: 19 times Tags (1): binfo	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	bget (v1) Created: 29/09/08 @ 13:58:00 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Retrieve database entries specified by a list of entry_id. Number of entry_id retrieves at a time is restricted up to 100 Example of input: eco:b0002 hin:tRNA-Cys-1 Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 36 times \| Downloaded: 16 times Tags (1): bget	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	bfind (v1) Created: 29/09/08 @ 13:21:12 \| Last updated: 29/09/08 @ 13:23:39 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Used for searching entries by keywords. User needs to specify a database from those which are supported by DBGET system before keywords. List of databases available at : http://www.genome.jp/dbget/ Example of input parameter: gb E-cadherin human Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 40 times \| Downloaded: 16 times Tags (1): bfind	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	bconv (v1) Created: 29/09/08 @ 12:13:41 \| Last updated: 29/09/08 @ 12:29:01 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Converts external IDs to KEGG IDs.External database: NCBI GI, NCBI GeneID, GenBank , UniGene , OMIM. Database prefix: ncbi-gi:, ncbi-geneid:, genbank: ,unigene: , uniprot: , omim: Example of input parameter: ncbi-gi:10047090 ncbi-geneid:14751 Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 81 times \| Downloaded: 40 times Tags (2): bconv \| convert	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	Retrieve_abstract_from_Medline (v1) Created: 17/09/08 @ 15:22:56 \| Last updated: 17/09/08 @ 15:24:22 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License This workflow retrieves Medline Abstracts given PMIDs (PubMed id) You can use: 9879 as input example to test this workflow Rating: 5.0 / 5 (1 rating) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 170 times \| Downloaded: 72 times Tags (3): abstracts \| medline \| pubmed	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	BLASTP with simplified results returned (v1) Created: 22/07/08 @ 15:53:06 \| Last updated: 22/07/08 @ 16:29:55 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Perform a blastp search on protein sequence and extract information based on the user input, e.g. a list of GI numbers. Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 139 times \| Downloaded: 28 times Tags (3): blast report \| extract ids \| extract sequence	View
Taverna 1 Original Uploader Franck Tanoh	Get weather information (v3) Created: 17/06/08 @ 16:25:49 \| Last updated: 20/06/08 @ 14:48:32 Credits: Franck Tanoh Stian Soiland-Reyes Attributions: Get weather information Get cities by country name License: Creative Commons Attribution-Share Alike 3.0 Unported License Get the weather forcast of the day for you city. Info display: wind, visibility, temperature, sky conditions and pressure. The default value Stian's home country. Rating: 0.0 / 5 (0 ratings) \| Versions: 3 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 258 times \| Downloaded: 93 times This Workflow has no tags!	View Download (v3)
Taverna 1 Original Uploader Franck Tanoh	getUPIForSequence workflow (v2) Created: 06/06/08 @ 09:59:59 \| Last updated: 06/06/08 @ 10:07:06 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Given a sequence retrieve the UPI (UniProt Archive (UniParc)) identifier. Rating: 0.0 / 5 (0 ratings) \| Versions: 2 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 30 times \| Downloaded: 0 times Tags (1): upi	View
Taverna 1 Original Uploader Franck Tanoh	Get cities by country name (v1) Created: 15/02/08 @ 23:20:04 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Get all the cities supported by the 'Get Weather info' workflow.... just enter your country name as input. Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 87 times \| Downloaded: 70 times This Workflow has no tags!	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	Get weather information (v1) Created: 15/02/08 @ 23:17:07 \| Last updated: 15/02/08 @ 23:21:19 Credits: Franck Tanoh License: Creative Commons Attribution-Share Alike 3.0 Unported License Get the weather forcast of the day for you city. Info display: wind, visibility, temperature, sky conditions and pressure. The default value is my home town. To find out any supported city run the 'Get cities by country name' workflow Rating: 0.0 / 5 (0 ratings) \| Versions: 1 \| Reviews: 0 \| Comments: 0 \| Citations: 0 Viewed: 123 times \| Downloaded: 64 times Tags (5): cities \| forecast \| temperature \| weather \| wind	View Download (v1)
Taverna 1 Original Uploader Franck Tanoh	Example of a conditional execution workflow (v2) Created: 03/10/07 @ 18:36:30 \| Last updated: 27/01/08 @ 21:09:41 License: Creative Commons Attribution-No Derivative Works 3.0 Unported License If the input is true the workflow returns the temperature in Celsius, if false the temperature in Fahrenheit is returned. Rating: 3.0 / 5 (1 rating) \| Versions: 2 \| Reviews: 0 \| Comments: 2 \| Citations: 0 Viewed: 111 times \| Downloaded: 57 times Tags (2): bioinformatics \| design pattern	View Download (v2)
Taverna 1 Original Uploader Franck Tanoh	Daily Dilbert (v2) Created: 03/10/07 @ 18:36:29 \| Last updated: 06/03/08 @ 16:59:35 License: Creative Commons Attribution-No Derivative Works 3.0 Unported License Retrieves the Daily Dilbert image ....to start the day with Rating: 2.5 / 5 (2 ratings) \| Versions: 2 \| Reviews: 0 \| Comments: 1 \| Citations: 0 Viewed: 123 times \| Downloaded: 73 times Tags (1): DailyDilbert	View Download (v2)
Taverna 1 Original Uploader Franck Tanoh	conditional branch (v2) Created: 03/10/07 @ 18:36:29 License: Creative Commons Attribution-No Derivative Works 3.0 Unported License Example of a conditional execution workflow. use 'false' or 'true' as input Rating: 0.0 / 5 (0 ratings) \| Versions: 2 \| Reviews: 0 \| Comments: 1 \| Citations: 0 Viewed: 152 times \| Downloaded: 77 times This Workflow has no tags!	View Download (v2)
Taverna 1 Original Uploader Franck Tanoh	keggID to Kegg pathways with BioMoby services (v3) Created: 03/10/07 @ 18:36:22 \| Last updated: 05/03/08 @ 13:59:55 License: Creative Commons Attribution-No Derivative Works 3.0 Unported License This workflow retrieves KEGG pathway id and image given a KEGG gene id. e.g hsa:6402 or eco:b0002 Rating: 4.0 / 5 (1 rating) \| Versions: 3 \| Reviews: 0 \| Comments: 2 \| Citations: 0 Viewed: 265 times \| Downloaded: 121 times Tags (3): kegg \| Kegg Pathways \| KeggID	View Download (v3)
Taverna 1 Original Uploader Franck Tanoh	BLASTP with simplified results returned (v2) Created: 03/10/07 @ 18:36:12 \| Last updated: 06/03/08 @ 17:01:32 License: Creative Commons Attribution-No Derivative Works 3.0 Unported License This workflow Performs a blastp search on protein sequence, extracts sequence id within the blast report and retrives the corresponding seuqences. Rating: 4.0 / 5 (2 ratings) \| Versions: 2 \| Reviews: 0 \| Comments: 2 \| Citations: 0 Viewed: 194 times \| Downloaded: 58 times Tags (3): bioinformatics \| BLAST \| sequence	View Download (v2)