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InviteUser: Gregg Iceton
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Name: Gregg Iceton Joined: Thursday 11 March 2010 @ 11:51:34 (GMT) Last seen: Wednesday 06 October 2010 @ 18:02:42 (GMT) Email (public): Not specified Website: Not specified Location: Not specified |
Gregg Iceton has been credited 3 times Gregg Iceton has an average rating of: 0.0 / 5 (0 ratings in total) for their items |
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Original Uploader |
Created: 17/03/10 @ 11:01:09 | Last updated: 17/03/10 @ 11:05:00
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow takes the file path to two genome nucleotide files in fasta format and requests a minimum similarity required from the user. The genomes are aligned according to the M-GCAT algorithm (http://alggen.lsi.upc.es/recerca/align/mgcat/intro-mgcat.html) and the genome similarity parsed out of the resultant log file. Output is either 0 (genome similarity less than required similarity) or 1 (genome similarity equal to or greater than the required similarity).
NB - The file p...
Rating: 0.0 / 5 (0 ratings) | Versions: 4 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 77 times | Downloaded: 31 times This Workflow has no tags! |
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Workflow
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Created: 19/03/10 @ 15:40:02 | Last updated: 19/03/10 @ 15:40:26
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License: Creative Commons Attribution-Share Alike 3.0 Unported License
Find pathways in which all the genes in the list are involved. For each pathway draw the pathway diagram. Colour all enzyme boxes with colours specified. This workflow still has one problem. The list of colours have to be specified. I would like ideally to only except one background and one foreground colour and expand that to a list with length equivalent to the number of enzymes found - just duplicating the specified colours. However with almost no Taverna documentation to speak of, none of...
Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 40 times | Downloaded: 17 times This Workflow has no tags! |
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