Get Gene Ids for Human

Created: 2010-02-04 12:47:16      Last updated: 2010-02-04 12:48:11

This workflow gets a list of gene ids (number depending on Ret_Max_value variable) for Homo sapiens. The species may be changed according to that desired, by altering the term_value string constant

Information Preview

Information Run

Run this Workflow in the Taverna Workbench...

Option 1:

Copy and paste this link into File > 'Open workflow location...'
http://www.myexperiment.org/workflows/1037/download?version=1
[ More InfoExpand ]

Run this Workflow on the cloud with OnlineHPC...

Click the link below to visit OnlineHPC
http://onlinehpc.com/workflows/editor?provider=myexperiment&workflowId=1037
[ More InfoExpand ]


Information Workflow Components

Information Authors (1)
Information Titles (2)
Information Descriptions (2)
Information Dependencies (0)
Inputs (0)
Processors (6)
Beanshells (0)
Outputs (2)
Datalinks (7)
Coordinations (0)

Information Workflow Type

Taverna 2

Information Uploader

Information License

All versions of this Workflow are licensed under:

Information Version 1 (of 1)

Information Credits (1)

(People/Groups)

Information Attributions (0)

(Workflows/Files)

None

Information Tags (8)

Log in to add Tags

Information Shared with Groups (0)

None

Information Featured In Packs (0)

None

Log in to add to one of your Packs

Information Attributed By (0)

(Workflows/Files)

None

Information Favourited By (0)

No one

Information Statistics

 

Citations (0)

None


Version History

In chronological order:



Reviews Reviews (0)

No reviews yet

Be the first to review!



Comments Comments (0)

No comments yet

Log in to make a comment




Workflow Other workflows that use similar services (30)

Only the first 2 workflows that use similar services are shown. View all workflows that use these services.


Workflow Perform a search through NCBI eUtils eSearch (3)

Thumb
This workflow takes in a search term and a database (e.g. snp, gene, protein) in which to perfom the search over. The result is an xml file containing summary information about the search term. Example input for this workflow are given below: database: pubmed terms: cancer AND diabetes

Created: 2009-11-27 | Last updated: 2009-12-03

Uploader

Workflow Escherichia coli : From cDNA Microarray Ra... (1)

Thumb
This workflow takes in a CDNA raw file and a normalisation method then returns a series of images/graphs which represent the same output obtained using the R and bioconductor. Also retruned by this workflow are a list of the top differentialy expressed genes (size dependant on the number specified as input - geneNumber), which are then used to find the candidate pathways which may be influencing the observed changes in the microarray data. By identifying the candidate pathways, more detailed...

Created: 2008-05-08 | Last updated: 2008-05-12

Credits: User Saeedeh User Paul Fisher

Attributions: Workflow HUMAN Microarray CEL file to candidate pathways