Log in
Register
Give us Feedback
InviteWorkflow Entry: BLAST against the GPCRDB
| Citations (0) | Version History | Reviews (0) | Comments (0) |
 Version 1
(of 1)
|
Version created on:
24/08/10 @ 13:45:14
by:
Bas Vroling
|
Revision comments 
Title: BLAST against the GPCRDB
Type: Taverna 2
Preview
(Click on the image to get the full size)
Download Scalable Diagram (SVG)
Description
With this workflow you can submit a BLAST query to the GPCRDB. Input requires a sequence with amino acids only.
Download
Run
Run this Workflow in the Taverna Workbench...
Option 1:
Copy and paste this link into File > 'Open workflow location...'
http://www.myexperiment.org/workflows/1485/download?version=1
[ More Info ]
Workflow Components
Authors (0)
Titles (0)
Descriptions (0)
Workflow Type
Log in to add Tags
Shared with Groups (0)
None
Current:
0.0 / 5
(0 ratings)
Log in to rate and see breakdown of ratings
Statistics
None
Earliest Version:
[1] - BLAST against the GPCRDB
This Workflow only has one version.
Reviews
(0)
Other workflows that use similar services
(2)
|
Original Uploader |
Created: 24/08/10 @ 13:58:32 | Last updated: 24/08/10 @ 13:58:35
Credits:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
This workflow allows you to create your own GPCR alignments. The alignments are built from the residues that are annotated with the general residue numbers. Alignments are therefore not built using standard alignment algorithms but are created by selecting residues that are likely to share the same position in the three-dimensional structure. Users can select the proteins and residue positions that should be aligned, allowing for the creation of e.g. an alignment of all binding pocket residue...
Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 32 times | Downloaded: 26 times Tags (5): |
 View
 Download (v1)
|
|
Original Uploader |
Created: 24/08/10 @ 13:37:05 | Last updated: 24/08/10 @ 13:42:54
Credits:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
This small workflow illustrates how to use the web service access provided by the GPCRDB in Taverna.
The proteinId input field is case sensitive and by default the identifiers in the GPCRDB are lowercase. You can try this mini-workflow with e.a. 'adrb2_human'.
Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 25 times | Downloaded: 14 times Tags (2): |
View
Download (v1)
|
Linked Data
Non-Information Resource URI: http://www.myexperiment.org/workflows/1485
Alternative Formats
Copyright © 2007 - 2011 The University of Manchester and University of Southampton
No comments yet
Log in to make a comment