Workflow Entry: NCBI BLAST (SOAP)

Created at: 29/11/10 @ 20:03:13      Last updated: 28/03/13 @ 12:44:56
Information Version 1 (of 1)

Version created on: 29/11/10 @ 20:03:13 by: Hamish McWilliam

Title: NCBI BLAST (SOAP)

Type: Taverna 2


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Information Description

Perform a BLAST search using the EMBL-EBI’s NCBI BLAST (SOAP) service (see http://www.ebi.ac.uk/Tools/webservices/services/sss/ncbi_blast_soap). The query sequence, database to search and BLAST program to use are inputs, the other parameters for the search are allowed to default.


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Information Authors (1)
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Inputs (5)
Processors (9)
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Outputs (3)
Datalinks (16)
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Information Workflow Type

Taverna 2

Information Original Uploader

Information License

All versions of this Workflow are licensed under:

Apache License v2.0

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Workflow Other workflows that use similar services (10)

Only the first 2 workflows that use similar services are shown. View all workflows that use these services.


Original Uploader

Workflow NCBI BLAST (SOAP) (1)

Created: 29/11/10 @ 20:46:58 | Last updated: 28/03/13 @ 12:45:26

Credits: User Hamish McWilliam

Attributions: Workflow EBI_NCBI_BLAST Workflow NCBI BLAST (SOAP)

License: Apache License v2.0

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Perform a BLAST search using the EMBL-EBI’s NCBI BLAST (SOAP) service (see http://www.ebi.ac.uk/Tools/webservices/services/sss/ncbi_blast_soap). The query sequence, database to search and BLAST program to use are inputs, the other parameters for the search are allowed to default.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 99 times | Downloaded: 58 times

Tags (7):

Original Uploader

Workflow Blast Report from ID (1)

Created: 07/04/11 @ 22:28:28 | Last updated: 07/04/11 @ 22:39:44

Credits: User Hectorj2f

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow retrieves a fasta sequence or blast report from an id. Firstly, given some inputs (e.g. ids:EDL10223.1, format:fasta, style:default and db:emblcds), it returns the sequence in fasta format associated to those inputs using the EBI's WSDbfetch web service (see http://www.ebi.ac.uk/Tools/webservices/services/dbfetch). Next, we obtain a Blast report from this fasta sequence and some others parameters. The final result in that case corresponds with the same fasta sequence introduced...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 59 times | Downloaded: 25 times

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Non-Information Resource URI: http://www.myexperiment.org/workflows/1688


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