Workflow Entry: EMBL-EBI ClustalW2 (SOAP)

Created at: 06/12/10 @ 13:16:52      Last updated: 28/03/13 @ 12:46:34
Information Version 1 (of 1)

Version created on: 06/12/10 @ 13:16:52 by: Hamish McWilliam

Title: EMBL-EBI ClustalW2 (SOAP)

Type: Taverna 2


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Information Description

Perform a ClustalW2 alignment using the EMBL-EBI’s ClustalW2 (SOAP) service (see http://www.ebi.ac.uk/Tools/webservices/services/msa/clustalw2_soap).


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Inputs (2)
Processors (17)
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Outputs (5)
Datalinks (23)
Coordinations (3)

Information Workflow Type

Taverna 2

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Information License

All versions of this Workflow are licensed under:

Apache License v2.0

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Workflow Other workflows that use similar services (3)

Only the first 2 workflows that use similar services are shown. View all workflows that use these services.


Original Uploader

Workflow M_Super_aln_boot_phylo_New (1)

Created: 18/04/11 @ 10:54:14 | Last updated: 18/04/11 @ 10:54:17

Credits: User Achille Zappa

Attributions: Workflow EMBL-EBI ClustalW2 (SOAP)

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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This workflow performs a generic protein sequence analysis. A multiple sequence alignment and finally a phylogenetic analysis.This workflow performs a generic protein sequence analysis. In order to do that a novel protein sequence enters into the software along with a list of known protein identifiers chosen by the biologist to perform a homology search, followed by a multiple sequence alignment and finally a phylogenetic analysis.This workflow performs "parallel" generic protein sequence ana...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 45 times | Downloaded: 51 times

This Workflow has no tags!

Original Uploader

Workflow EMBL-EBI ClustalW2_SOAP (2)

Created: 17/01/11 @ 16:48:40 | Last updated: 30/01/13 @ 12:57:29

Credits: User Katy Wolstencroft User Hamish McWilliam

Attributions: Workflow EMBL-EBI ClustalW2 (SOAP) Workflow EBI_ClustalW2

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Thumb
Perform a ClustalW2 alignment of protein sequences using the EMBL-EBI’s ClustalW2 (SOAP) service (see http://www.ebi.ac.uk/Tools/webservices/services/msa/clustalw2_soap). This workflow uses the new EBI services, which are asynchronous and require looping over the nested workflow (Status) until the workflow has finished. Many of the EBI services now work in this way, so you can use this workflow as an example of the invocation pattern and looping configuration.

Rating: 0.0 / 5 (0 ratings) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 115 times | Downloaded: 71 times

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Non-Information Resource URI: http://www.myexperiment.org/workflows/1705


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