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Mouse Microarray Analysis

Created: 2007-10-03 18:36:05      Last updated: 2009-12-03 16:20:33

This workflow takes in probesets from and AffyMetrix micorarray experiment and returns: the genes ; gene start and end positions; chromosome where genes reside; ensembl trasncripts; SwissProt ids; affy probeset identifiers for chips Mouse430_2 and Mouse430a_2.

Example ids from the Mouse430_2 affymetrix array are as follows (newline separated):

1447227_at
1440624_at
1436240_at
1454904_at
1435665_at
1418148_at
1429831_at

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Citations (1)

1. Fisher P, Hedeler C, Wolstencroft K, Hulme H, Noyes H, Kemp S, Stevens R, Brass A, A systematic strategy for large-scale analysis of genotype phenotype correlations: identification of candidate genes involved in African trypanosomiasis., Nucleic Acids Research, 20 August 2007, http://nar.oxfordjournals.org/cgi/content/full/35/16/5625


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  • Friday 20 June 2008 15:15:40 (UTC)

    Do you have some example inputs for running this workflow..?




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