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InviteWorkflow Entry: getUPIForSequence workflow
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 Version 2 (latest)
(of 2)
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Version created on:
06/06/08 @ 09:59:59
by:
Franck Tanoh
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Revision comments 
Last edited on: 06/06/08 @ 10:07:06 by: Franck Tanoh
Title: getUPIForSequence workflow
Type: Taverna 1
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Description
Given a sequence retrieve the UPI (UniProt Archive (UniParc)) identifier.
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Earliest Version:
[1] - picr workflow
Latest Version:
[2] - getUPIForSequence workflow
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Original Uploader |
Created: 14/10/11 @ 17:45:28 | Last updated: 27/10/11 @ 10:39:21
Credits:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
Get homologous from NCBI homoloGene for a lsit of UniProt protein accession. Use PICR to convert UniProt to RefSeq, get homologous from homoloGene and convert RefSeq results to UniProt. Be patient, the workflows has to bring a file around 11Mb. ftp://ftp.ncbi.nlm.nih.gov/pub/HomoloGene/README
Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 11 times | Downloaded: 4 times Tags (3): |
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Original Uploader |
Created: 14/10/11 @ 17:26:32 | Last updated: 14/10/11 @ 17:26:28
Credits:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
Get homologous from NCBI homoloGene for one UniProt protein accession. Use PICR to convert UniProt to RefSeq, get homologous from homoloGene and convert RefSeq results to UniProt. Be patient, the workflows has to bring a file around 11Mb. ftp://ftp.ncbi.nlm.nih.gov/pub/HomoloGene/README
Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 18 times | Downloaded: 4 times Tags (3): |
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