Version 2 (latest)
(of 2)
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Version created on:
03/10/07 @ 18:36:12
by:
Franck Tanoh
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Revision comments
Last edited on: 06/03/08 @ 17:01:32 by: Franck Tanoh
Title: BLASTP with simplified results returned
Type: Taverna 1
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Description
This workflow Performs a blastp search on protein sequence, extracts sequence id within the blast report and retrives the corresponding seuqences.
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Option 1:
Note: you need to have both the WHIP Launcher and the Taverna myExperiment/WHIP plugin installed on your machine for this to work. See here for information.
Option 2:
Copy and paste this link into File > 'Open workflow location...'
http://www.myexperiment.org/workflows/32/download?version=2
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[1] - BLASTP with simplified results returned
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[2] - BLASTP with simplified results returned
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Original Uploader |
Created: 01/09/10 @ 17:16:24 | Last updated: 01/09/10 @ 17:18:45
Credits:
Attributions:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
retrieve protein sequence and do a high speed BLAST from DDBJ Web services
informations on Web services available at http://xml.nig.ac.jp/index.html
example
accession : Q9NRA8
database : ddbjbct
program : tblastn
param : -b 100 -v 100
Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 19 times | Downloaded: 13 times Tags (6): |
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Original Uploader |
Created: 15/04/08 @ 15:13:54
Credits:
License: Creative Commons Attribution-Share Alike 3.0 Unported License
No description
Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0 Viewed: 52 times | Downloaded: 0 times This Workflow has no tags! |
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Linked Data
Non-Information Resource URI: http://www.myexperiment.org/workflows/32
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