Workflow Entry: Multiple Protein Alignment Profiling(1)

Created at: 13/01/10 @ 18:52:45      Last updated: 17/11/10 @ 14:13:20
Information Version 4 (latest) (of 4)
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Version created on: 17/11/10 @ 14:13:19 by: Carol Lushbough   |   Revision comments Expand

Title: Multiple Protein Alignment Profiling(1)

Type: BioExtract Server


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Information Description

Designed from an example workflow at Traverna, this workflow retrieves a set of sequences from UniProt, then simultaneously scans for transmembrane regions and performs a multiple alignment using EMMA. The alignment is then plotted to a set of PNG images, followed by a profile analysis using prophecy and prophet tools.


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Information Workflow Type

BioExtract Server

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Version History

Earliest Version:
[1] - A BioExtract Server Workflow version of the EMBOSS tutorial

Created on: Thursday 15 January 2009 @ 14:37:01 (GMT)

Created by: Carol Lushbough

Last edited on: Monday 08 June 2009 @ 10:30:48 (GMT)

Last edited by: Carol Lushbough

Revision comments:

None

Previous Versions:
[2] - A BioExtract Server Workflow version of the EMBOSS tutorial

Created on: Thursday 20 August 2009 @ 13:51:19 (GMT)

Created by: Carol Lushbough

Last edited on: Wednesday 06 January 2010 @ 22:07:49 (GMT)

Last edited by: Carol Lushbough

Revision comments:

None

[3] - Multiple Protein Alignment Profiling

Created on: Wednesday 13 January 2010 @ 18:52:45 (GMT)

Created by: Carol Lushbough

Last edited on: Wednesday 17 November 2010 @ 14:11:37 (GMT)

Last edited by: Carol Lushbough

Revision comments:

 Functionality was added to allow the workflow to be executed within myExperiment

Latest Version:
[4] - Multiple Protein Alignment Profiling(1)

Created on: Wednesday 17 November 2010 @ 14:13:19 (GMT)

Created by: Carol Lushbough

Revision comments:

Updated query to definition= opsin-2



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Workflow Other workflows that use similar services (0)

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Non-Information Resource URI: http://www.myexperiment.org/workflows/627


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