Log in
Register
Give us Feedback
Invite
Workflow Entry: A workflow version of the EMBOSS tutorial
| Citations (0) | Version History | Reviews (0) | Comments (0) |
 Version 1
(of 1)
|
Version created on:
05/03/08 @ 14:05:20
by:
Alan Williams
|
Revision comments 
Last edited on: 25/03/08 @ 14:43:35 by: Alan Williams
Title: A workflow version of the EMBOSS tutorial
Type: Taverna 1
Preview
(Click on the image to get the full size)
Download Scalable Diagram (SVG)
Description
Designed to show the use of EMBOSS based Soaplab services from Taverna, this workflow has no inputs as all initial values are specified as string constants. A sequence set is fetched using the seqret tool, then simultaneously scanned for predicted transmembrane regions and subjected to a multiple alignment using emma. This alignment is then plotted to a set of PNG images and also used to build a profile using the prophecy and prophet tools.
Download
Download Workflow File/Package (SCUFL)
Run
Run this Workflow in the Taverna Workbench...
Option 1:
Launch in TavernaNote: you need to have both the WHIP Launcher and the Taverna myExperiment/WHIP plugin installed on your machine for this to work. See here for information.
Option 2:
Copy and paste this link into File > 'Open workflow location...'
http://www.myexperiment.org/workflows/159/download?version=1
[ More Info ]
Workflow Components
All versions of this Workflow are licensed under the Creative Commons Attribution 3.0 License.
Log in to add Tags
Shared with Groups (1)
Current:
0.0 / 5
(0 ratings)
Log in to rate and see breakdown of ratings
Statistics
477 viewings
416 downloads
None
Earliest Version:
[1] - A workflow version of the EMBOSS tutorial
This Workflow only has one version.
Reviews
(0)
Copyright (c) 2007 - 2008 The University of Manchester and University of Southampton
No comments yet
Log in to make a comment