Multiple Protein Alignment Profiling(1)

Created: 2010-01-13 18:52:45      Last updated: 2010-11-17 14:13:20

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This workflow is designed to demonstrate the use of EMBOSS based Soaplab services from within the BioExtract Server.  It begins by querying UniProt for "ops2_*". This input query string may be modified to meet the needs of the researcher.  A sequences resulting in the query are  simultaneously scanned for predicted transmembrane regions and subjected to a multiple alignment using emma. This alignment is then plotted to a set of PNG images and also used to build a profile using the prophecy and prophet tools.

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