Workflow Entry: Query Maxd microarray database

Created at: 14/11/07 @ 16:01:50 Last updated: 22/11/07 @ 12:06:32

Version 1 (of 1)

Version created on: 14/11/07 @ 16:01:50 by: Peter Li | Revision comments Expand

Last edited on: 22/11/07 @ 12:06:32 by: Peter Li

Title: Query Maxd microarray database

Type: Taverna 1

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Description

Retrieves data from the maxd database given name of data set

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Option 1:

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Note: you need to have both the WHIP Launcher and the Taverna myExperiment/WHIP plugin installed on your machine for this to work. See here for information.

Option 2:

Copy and paste this link into File > 'Open workflow location...'
http://www.myexperiment.org/workflows/77/download?version=1
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Workflow Components

Inputs (0)

Processors (3)

Name	Type	Description
cleanOutput	beanshell	Cleans a data set from maxd to generate a valid csv file
queryMaxd	arbitrarywsdl	Will take a list of Gene names, a list of Measurement names and a list of Column Types and produce a table. All values are coloured in relation to the a reference. In the list of Measurement names, the first Measurement listed is taken to be the reference. Formatted as text.
datasetName	stringconstant	Provides name of data set to be retrieved from maxd database