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GBSeq test

Workflow Entry: GBSeq test

Created at: 03/07/09 @ 14:48:38

| License | Credits (1) | Attributions (1) | Tags (0) | Featured in Packs (1) | Ratings (0) | Attributed By (0) | Favourited By (0) |
| Citations (0) | Version History | Reviews (0) | Comments (0) |

Information

Version 1 (of 1)

Version created on: 03/07/09 @ 14:48:39 by: Stian Soiland-Reyes | Revision comments Expand

Title: GBSeq test

Type: Taverna 2

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Description

This workflow retrieves nucleotide and protein sequences with the literature and references associated to them given a protein and a nucleotide id.

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http://www.myexperiment.org/workflows/825/download?version=1
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Workflow Components

Information

Authors (1)

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Titles (1)

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Descriptions (1)

Inputs (0)

Processors (10)

Beanshells (0)

Outputs (8)

Datalinks (16)

Source	Sink
nuc_id:value	Get_Nucleotide_INSDSeq_XML:id
protein_id:value	Get_Protein_FASTA:id
protein_id:value	Get_Protein_INSDSeq_XML:id
protein_id:value	Get_Protein_TinySeq_XML:id
nuc_id:value	Get_Nucleotide_FASTA:id
nuc_id:value	Get_Nucleotide_GBSeq_XML:id
protein_id:value	Get_Protein_GBSeq_XML:id
nuc_id:value	Get_Nucleotide_TinySeq_XML:id
Get_Protein_GBSeq_XML:outputText	protein_xml
Get_Nucleotide_GBSeq_XML:outputText	nuc_xml
Get_Nucleotide_TinySeq_XML:outputText	nuc_tiny
Get_Nucleotide_FASTA:outputText	nuc_fasta
Get_Protein_FASTA:outputText	prot_fasta
Get_Protein_INSDSeq_XML:outputText	prot_insd
Get_Nucleotide_INSDSeq_XML:outputText	nuc_insd
Get_Protein_TinySeq_XML:outputText	prot_tiny

Coordinations (0)

Information Workflow Type

Information Original Uploader

9?size=60x60

Stian Soiland-Reyes

Information License

All versions of this Workflow are licensed under:

Information Credits (1)

(People/Groups)

Stian Soiland-Reyes

Information Attributions (1)

(Workflows/Files)

GBSeq test

Information Tags (0)

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Information Shared with Groups (1)

myGrid

Information Featured In Packs (1)

Taverna 2.1 beta 2 example workflows

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Information Ratings (0)

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Information Attributed By (0)

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None

Information Favourited By (0)

No one

Information Statistics

429 viewings

504 downloads

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Citations (0)

None

Version History

Earliest Version:
[1] - GBSeq test

Created on: Friday 03 July 2009 @ 14:48:39 (GMT)

Created by: Stian Soiland-Reyes

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This Workflow only has one version.

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Linked Data

Non-Information Resource URI: http://www.myexperiment.org/workflows/825

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